Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra2g1462 ATGACCAAACTGAAAGAGCTGATTGGGAGGTTGAAGGACAAAGCGTCGCAGGGCAAAGCCGCCATCCTCTCCAAACGCGCCACTCTCTCTCTCCTACGCGCCACTAGCCACGACCCCTTCACCCCTCCCACCTCCAATCACCTCTCCACGTTCCTCATCGCCGGCGATGGATCACGAGTCACGGCCTCCGCCGCCATGGAGCTTCTCATGGACCGCCTCCAGAGCACCCAGAGCTCTGCCGTGGCGCTCAAGTGCCTCATCGCCATCCACTGCGTGGTAAAGCGCGGCAGCTTCATCATGAGAGATCAGCTTCCGTACAGCTGCGGCGGCGGCGGCAGGAACTACCTTAACCTCTCCAAATTCCGCGATAGGAGCAGTCCCGTATCCTGGGAACTGTCTTCGTGGGTACGATGGTACGCTAAACACGTGGAACAGCTTCTCTGGGCTTCCAGGATCGTTGGCTTCTTCCTCGGCGTTGAAGCTGAAGAAGACTCAAGTCAAGGGTGGTGGACGAAAGCAGGAGAAGAGAGAGCTTCAAGCCTTAGCAACGGTGAGCTGTTGAGAGAGACGGATGCTCTGTTGGCGGTTATTGAAGGGATTGGGGGAATACCCGACGCAGCATGCATGGAAGGGAACAAGCTAGTTGGTGAGATATGGAGTGTGGTGGAAGAGGATGTGATTGTGGCGCTGAGCGAGGTTTTGGTTAGAGTTAACGAGTTGAGGGAGCGTTTTGGGTGTCTGAGTTTTGGAGAAGTGGTGGAGTTGGTTTACGTGTTGAACAGATTGGAGAAGTGCAAAGAGACGGTGGAAGAGGTGGTGGTGGTGGTGGCAGAGAAACAGAGATTATTATGGGATGTAGTGAGAGAAGTGAAGGAGAAGGTTGAGAAGAAGGTGTTCAGGGAAGAAGGGAAAACGATGAGAAGACAGAGACACAGGACAACAAAGTCAGAAAGGTTTGAATTTCCGACGCTTTTGATCGATTCTCTTGATTTGGTTCGGTTTCCCTCCGCAAGGTTGTTGTGA 1023 0.5347 MTKLKELIGRLKDKASQGKAAILSKRATLSLLRATSHDPFTPPTSNHLSTFLIAGDGSRVTASAAMELLMDRLQSTQSSAVALKCLIAIHCVVKRGSFIMRDQLPYSCGGGGRNYLNLSKFRDRSSPVSWELSSWVRWYAKHVEQLLWASRIVGFFLGVEAEEDSSQGWWTKAGEERASSLSNGELLRETDALLAVIEGIGGIPDAACMEGNKLVGEIWSVVEEDVIVALSEVLVRVNELRERFGCLSFGEVVELVYVLNRLEKCKETVEEVVVVVAEKQRLLWDVVREVKEKVEKKVFREEGKTMRRQRHRTTKSERFEFPTLLIDSLDLVRFPSARLL* 341
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra2g1462 340 Pfam ANTH domain 30 157 IPR011417 GO:0005543
Vra2g1462 340 SMART enth_2 25 157 IPR013809 -
Vra2g1462 340 PANTHER CLATHRIN ASSEMBLY PROTEIN 1 339 IPR045192 GO:0048268|GO:0072583
Vra2g1462 340 Gene3D - 3 155 IPR008942 -
Vra2g1462 340 SUPERFAMILY ENTH/VHS domain 29 154 IPR008942 -
Vra2g1462 340 CDD ANTH_N_AP180_plant 29 150 - -
Vra2g1462 340 PANTHER OS09G0468150 PROTEIN 1 339 - -
Vra2g1462 340 ProSiteProfiles ENTH domain profile. 19 157 IPR013809 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra2g1462 Vra-Chr2 22633948 22635652 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra2g1462 - K20043 gmx:100808393 402.134