Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra2g1461 ATGTGCTGTGCCGCTGGACATTACTGTTCTAAGAAGAACAGTGATGTTTGTGGCCAGGAGTCAAGTCATGTCTGGGGCATGTCAAGAATCTGCTGCATTTTGCGTGCTTTGGATGTAAAAACATTAATATTTGTTTTTGCTGTTGTGCCAATGTGCACATTTGGCATATACTTGCACGGACAGAAAATCTCCTACTTCCTTAGGCCACTATGGGAAAAACCTCCGAAGCCTTTCAATGTAATTCCTCATTACTATAACGAAATTGTGTCCATGGAAAATCTCTGCAGACTTCATGGCTGGGGAGTGCGTGAGTTCCCAAGACGTGTGTACGATGCTGTGTTGTTCAGCAACGAATTGGAGATACTTAACCTGCGCTGGAGAGAACTGTATCCTTACATAACACAGTTTGTTCTGCTTGAATCAAATTCCACATTCACGGGTAGGCCTAAACCTCTGGTTTTCAAAGGCAACCGGGAGCAGTTCAGATTTGTGGATTCCCGGTTAACATATGGAACCATTGGTGGGAGATTCATCAAAGGAGAAAACCCGTTCATCGAAGAGGCTTATCAGCGTGTAGCATTGGACCATCTCCTTAAGATAGCTGGTATCACAGATGATGACTTGCTGATAATGTCTGATGTTGATGAGATTCCAAGTGCTCACACTATTAACCTCTTGCGGTGGTGTGATGATGTGCCTTCAATCCTTCATCTTCAGCTGAAGAACTATCTATATTCATTTGAGTTTCTTGCGGATGATAACAGCTGGAGAGCCTCTGTGCACAGGTATCAGAGTGGTAAGACAAGGTATGCACATTACCGCCAATCTGATAACTTATTGTCAGATGCTGGTTGGCATTGCAGCTTCTGCTTCCGCCGTATCAGCGATTTCATCTTTAAGATGAAAGCTTATAGTCATAATGACAGAGTCAGATTCTCTCATTATTTAAATCCCAAGAGAATTCAAGACGTAATATGCAAAGGGGCTGATTTGTTTGATATGCTACCAGAGGAGTACACCTTCAAGGAAATCATTGGTAAAATGGGACCAATACCCCACTCCTATTCTGCAGTTCATCTTCCTGCTTATCTACTGAAAAATGCAGACAAGTATAGATTTCTCTTGCCTGGAAATTGCTTGAGAGAGGACAGATGA 1155 0.4268 MCCAAGHYCSKKNSDVCGQESSHVWGMSRICCILRALDVKTLIFVFAVVPMCTFGIYLHGQKISYFLRPLWEKPPKPFNVIPHYYNEIVSMENLCRLHGWGVREFPRRVYDAVLFSNELEILNLRWRELYPYITQFVLLESNSTFTGRPKPLVFKGNREQFRFVDSRLTYGTIGGRFIKGENPFIEEAYQRVALDHLLKIAGITDDDLLIMSDVDEIPSAHTINLLRWCDDVPSILHLQLKNYLYSFEFLADDNSWRASVHRYQSGKTRYAHYRQSDNLLSDAGWHCSFCFRRISDFIFKMKAYSHNDRVRFSHYLNPKRIQDVICKGADLFDMLPEEYTFKEIIGKMGPIPHSYSAVHLPAYLLKNADKYRFLLPGNCLREDR* 385
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra2g1461 384 Pfam Glycosyltransferase family 17 37 382 IPR006813 GO:0003830|GO:0006487|GO:0016020
Vra2g1461 384 PANTHER BETA-1,4-MANNOSYL-GLYCOPROTEIN BETA-1,4-N-ACETYLGLUCOSAMINYL-TRANSFERASE 4 383 IPR006813 GO:0003830|GO:0006487|GO:0016020
Vra2g1461 384 PANTHER BETA-1,4-N-ACETYLGLUCOSAMINYLTRANSFERASE FAMILY PROTEIN 4 383 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra2g1461 Vra-Chr2 22628333 22630568 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vra2g1461 1 382 Glycosyltransferase AT1G12990 77.461 0.0 652
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra2g1461 K00737 - gmx:100780085 736.102