Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra2g1455 ATGGGAGTCATCCACAACAAGAAAACGTTGCTTTCTCCTGCGTTGAGAGAGAGAAAGTGGAGAGAGAAAGTAGAGAGAGAGAGAGAACCAGAAAGAGAGAGAACTCACTCCATTCCGAATCGGAGCATAGCGGAGCTCCGCCACTCCTCTTCCCTCGGCAGCCGAGCCTCCAATTCTCCGATGAAGCGTGACGCCGTTGCCGTCGCCGTCGGCGGCGGCGGCGATTCCTCTCCACTCCTTCCCGACAGCCACCTCACCGACGACGACGAGCACGATCGCCACTCGTCCAAGGAGCGCGACCGGCACGTCTGCTCCTTCTTGAACGACGACCCTAGGGTTTCGCCTCACAACTCCAGGATCTCTCTGTTTTTCACCTTCCTTCTTCTACTCGTTGGTTTAGTTTCTGTATTCACAATCTTCCATAAACTCAATGCCCCTTACCTGTGTAAAAAGGACGGCATTGTTCTTCATTGCCCACATGTCAAGGAATCGCCATCTCTTTGGGAAAATCCTCTCTCATCCACAACATCTTGGAGGCCCTGTGCCGAGCGCCGGGATGGCGTTTTATCAGAGCTTCCTCATGAAAATGAAACAAACGGCTATATATTCATCCATGCTGAGGGTGGTCTAAATCAGCAAAGGATTGCGATATGCAATGCTGTGGCTGTAGCCAAAATAATGAATGCCACTCTTATTTTGCCTGTTTTGAAGCAGGATCAAATTTGGAAAGACCAAACGAAATTTGAAGACATTTTTGATGTGGATCATTTCATTGACTACCTTAAGTATGACGTTCGTATTGTACGTGATATCCCACAATGGTTTACTGATAAATCAGAGCTATTTTCTAGCATAAGACGGACTGTAAAAAACATTCCAAAATATGCACCAGCACAATTTTACATTGATAATGTTCTGCCCCGGATCAAGGAGAAGAAGATTATGGCTCTTAAACCATTTGTTGACAGGCTGGGATATGACAATGTTCCTCCTGAAATCAACAAGCTGAGATGTAGAGTTAATTATCATGCACTGAAATTTCTTCCTGAGATAGAGCAGATGGCTGATTCACTGGCATCAAGAATGAGAAACCGAACTGGAAATTCAAATCCTTATATGGCTTTGCATCTCAGATTTGAGAAAGGAATGGTGGGACTATCATTCTGTGATTTTGTGGGGACAAGAGAGGAGAAAGTCAAAATGGCAGAGTATAGAAAAAAGGAGTGGCCTCGACGGTACAAGAATGGTTCCCATCTGTGGCAATTAGCTCTACAGAAGCGTAAGGAAGGACGATGTCCTCTAGAGCCTGGAGAAGTGGCCGTTATTCTTCGGGCTATGGGCTATCCTAAGGAAACTCAAATTTACGTTGCTTCTGGACAGGTTTATGGTGGACAGAACCGGATGGCTCCACTAAGAAATATGTTCCCTAATCTGGTTACTAAGGAGGAGCTAGCAACCAAAGAGGAGTTAGATGGTTTCAGAAAGCATGTGACAAGCCTAGCAGCTCTTGACTTCTTAGTGTGCTTGAAGTCAGATGTATTCGTGATGACCCATGGAGGCAACTTTGCTAAGCTGATTATCGGCGCCCGTAGATACATGGGTCACCGTCTAAAGTCAATTAAGCCTGACAAAGGGCTAATGTCAAAGTCTTTTGGGGATCCGTACATGGGTTGGGCTACTTTTGTAGAAGATGTTGTTGTTACTCACCAGACGCGAACGGGATTGCCGGAAGAGACTTTCCCTAACTATGATCTCTGGGAGAACCCTCTGACTCCATGCATGTGTAGAGCCTGA 1794 0.4615 MGVIHNKKTLLSPALRERKWREKVEREREPERERTHSIPNRSIAELRHSSSLGSRASNSPMKRDAVAVAVGGGGDSSPLLPDSHLTDDDEHDRHSSKERDRHVCSFLNDDPRVSPHNSRISLFFTFLLLLVGLVSVFTIFHKLNAPYLCKKDGIVLHCPHVKESPSLWENPLSSTTSWRPCAERRDGVLSELPHENETNGYIFIHAEGGLNQQRIAICNAVAVAKIMNATLILPVLKQDQIWKDQTKFEDIFDVDHFIDYLKYDVRIVRDIPQWFTDKSELFSSIRRTVKNIPKYAPAQFYIDNVLPRIKEKKIMALKPFVDRLGYDNVPPEINKLRCRVNYHALKFLPEIEQMADSLASRMRNRTGNSNPYMALHLRFEKGMVGLSFCDFVGTREEKVKMAEYRKKEWPRRYKNGSHLWQLALQKRKEGRCPLEPGEVAVILRAMGYPKETQIYVASGQVYGGQNRMAPLRNMFPNLVTKEELATKEELDGFRKHVTSLAALDFLVCLKSDVFVMTHGGNFAKLIIGARRYMGHRLKSIKPDKGLMSKSFGDPYMGWATFVEDVVVTHQTRTGLPEETFPNYDLWENPLTPCMCRA* 598
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra2g1455 597 PANTHER O-FUCOSYLTRANSFERASE 2-RELATED 44 597 - -
Vra2g1455 597 MobiDBLite consensus disorder prediction 42 58 - -
Vra2g1455 597 CDD O-FucT_plant 201 536 IPR024709 -
Vra2g1455 597 Gene3D - 342 540 - -
Vra2g1455 597 PANTHER PROTEIN PECTIC ARABINOGALACTAN SYNTHESIS-RELATED 44 597 - -
Vra2g1455 597 MobiDBLite consensus disorder prediction 1 100 - -
Vra2g1455 597 MobiDBLite consensus disorder prediction 11 41 - -
Vra2g1455 597 PIRSF UCP009360 82 597 IPR024709 -
Vra2g1455 597 Pfam GDP-fucose protein O-fucosyltransferase 201 533 IPR019378 -
Vra2g1455 597 MobiDBLite consensus disorder prediction 82 100 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra2g1455 Vra-Chr2 22590688 22596171 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vra2g1455 165 595 Miscellaneous Gene Families AT2G37980 37.557 1.60e-94 301
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra2g1455 - - vra:106753406 1179.85
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vra2g1455 2 22590688 22596171 Vra2g1455 2 22590688 22596171 ECH