Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra2g1451 ATGCAACGTGATAATCTTATAAAGAAGCTCCTCCTTACACATGATCCAGATGGTCGTAGGTTGGATTCTGAGGCAATTCTTCTTGCAGTGGGCAACATTATGTTTCATTCTTCCAAAATAATAGTGACTTCTAATTTATATTCTGCTTCCTTTCACAAGACGGATATAACTGAAATAGAAACGATTGGTTGTAGTGAATCGGTTGGATTCATCATCACAAAAATATGCAAGATGCTCTGCAGATGCTCTGGTGAAGGTGATATTAACTCAAGGGTCATAAATTTGTTTGATTTGATAGGGAAGTATAGCTGGGACGCAAAAGTAGTTCTAGTGCTTGCTGCTTTTGCTGTAAGATATGGTGAATTTTGGCAACTTATGCAGCTACATCATGGTAACAGTTTGGCAGCTTTAATTTCAAGTATTAAGAGGCTTCCCTGCAACTTAAAGCCACTGAAGCTACAAATCAAGGCATTGAGCTTGTTGGTTGAGACCATGATGGATGTGGCTATGTGTATAATTAAGTTTGAATACTTGCCTCTTCAACATGTAGAGCATGGAAATCGTATATTCCGTGTCACAAAGTCTCAAATATACGAAGCTGCGTACTGGGTCGCCAGAAGCTGTTTAGCATGTTTTTCCCAAGTCAAGGACTTCACAACCAAACAACATGAGCAAGTGTACTCAGATTCAGCAATAATTGCTGCTTGGGAGCTTTCAAGTTTGGCGTATAGATTAAGTGGCACAGGCTGCAATCTTAGAAGACAGGTGGATCTGTGTTACGAAGAAATAGAGAGAAACTTGTATCAGAGGCTGTCGGATCTTGCTCGTGAGGAGCACATTGATAATCAAAAGATTCTCACTTTATTTTTTCCTTCAAACAATTACTTGCCACTGAAGGATTGCTCAACAGAAGTAAAGTTAGGTGTGTCTGAGCTGAAAAACCAGATAGTTCTGTTGTTGATCACAAAACCACAGCTACTCAGCCCAGTGGATATATTCTTACTTGTCCAGAAAACATGCGATCATCCTCTGAATGAGAGGCTGAAGGAGAGTTATAAGATTGTGTGGATTCCCCTTCCATCTTCTGATTCATGGACTGAAGCTGAAGAAAGTAGTTTTAATTTTTTGTCAGATTCCTTGCCTTGGCATGCTGTTCGGAAACCAAGGTTACTTAGCCCAGCAGTGGTCAAGTACATAAGGGAAAGATGGAACTACAAGGATGAGCCCATCATGGTGGCTCTAGATTCGAAAGGGAAGGTCACAAATTACAATGCTCTTGATATGATCAACATTTGGGGAGCCAAAGCTTACCCTTTTTCAGCTTCCAAAGAGGAAGAGCTGTGGCAAGACCAAAATTTGACAATGCAACTTTTGCTGGATGAGATCAATCCTCTCCTTGCTTATTGGGTTGAGCAAGGCAAAAGTATTTGCCTTTATGGGAGTGAAAACTTGGTTTGGATCCAACAATTCAATGATAAGATAAATGAGCTCAAACGAGTAGGTCTGCAGCTGGAAACAATATATGTTGGTAATAGTCAATTGGGTGAACGTGTTAAGCAAATAATGGCAAGAAGTGGTGCAACAAGTCGCAGTGATCCACTTTCCTTCACAAACGTGCAATTCTTCTGGCTTAGGTTGGCGAGTATGTTAAGGTCTAAACTCAGACTAGGGAAGACACCAAGTGGTGATTATGTACTAGCAGAGTTGTCAGCTTTGCTTGAAATGGATGATAGGGAGGAAGGTTGGGCAGTGATTGGAAGTGGGGGTTCAACAGATACTATCAGGCTTCAAGGGATGCAGGTGATGGAATTCTTAAGGAAATGTTCTGTGTGGAGAGAAAATATAACCAAGTTTGGATTGTGGGGTTCTCCAAGAAACATCCTAGAAACTGATTTTGTTGGAGGGAGTTGCACTCACTCTTACTTTGTTCCCTCGAGTAAAAATGGAAGACTGAGTCAAGGAACTGTAATTTGTCAACTGTGCAAGCGTCCCATGAAGAAGTTCGTGGTGTACAAGCCATGA 2022 0.4105 MQRDNLIKKLLLTHDPDGRRLDSEAILLAVGNIMFHSSKIIVTSNLYSASFHKTDITEIETIGCSESVGFIITKICKMLCRCSGEGDINSRVINLFDLIGKYSWDAKVVLVLAAFAVRYGEFWQLMQLHHGNSLAALISSIKRLPCNLKPLKLQIKALSLLVETMMDVAMCIIKFEYLPLQHVEHGNRIFRVTKSQIYEAAYWVARSCLACFSQVKDFTTKQHEQVYSDSAIIAAWELSSLAYRLSGTGCNLRRQVDLCYEEIERNLYQRLSDLAREEHIDNQKILTLFFPSNNYLPLKDCSTEVKLGVSELKNQIVLLLITKPQLLSPVDIFLLVQKTCDHPLNERLKESYKIVWIPLPSSDSWTEAEESSFNFLSDSLPWHAVRKPRLLSPAVVKYIRERWNYKDEPIMVALDSKGKVTNYNALDMINIWGAKAYPFSASKEEELWQDQNLTMQLLLDEINPLLAYWVEQGKSICLYGSENLVWIQQFNDKINELKRVGLQLETIYVGNSQLGERVKQIMARSGATSRSDPLSFTNVQFFWLRLASMLRSKLRLGKTPSGDYVLAELSALLEMDDREEGWAVIGSGGSTDTIRLQGMQVMEFLRKCSVWRENITKFGLWGSPRNILETDFVGGSCTHSYFVPSSKNGRLSQGTVICQLCKRPMKKFVVYKP* 674
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra2g1451 673 PANTHER PROTEIN SIEVE ELEMENT OCCLUSION B-LIKE 2 672 IPR039299 GO:0010088
Vra2g1451 673 Pfam Sieve element occlusion N-terminus 4 279 IPR027942 -
Vra2g1451 673 PANTHER PROTEIN SIEVE ELEMENT OCCLUSION C 2 672 - -
Vra2g1451 673 Pfam Sieve element occlusion C-terminus 442 672 IPR027944 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra2g1451 Vra-Chr2 22559932 22563824 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra2g1451 - - pvu:PHAVU_001G256100g 1223.38
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vra2g1451 2 22559932 22563824 Vra2g1451 2 22559932 22563824 ECH