Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra2g1447 ATGAATCCTCTGTGCTGCATTGCACCGGTTTCGATCGATCGGGACAGGGCGAACCCTGTGGTGGCGAAATCGCCGAGTCAGTGTCAGCTAGGGCTCGATGCGGCTGTCAGGACGGTGAACTACGCGTCCAAATCGAGCTTCTCCACGCTGGATTCCTCAGTAGGTTCGGATTCTGTCAAGGCATCCGCTGCTGCGGATCTCGAGGAGGAGGAGGAGCCGCGCGATTCCAAGGCTTTTGGAGGCGGGAATGGAGGCGGCGTCGCCGGGAGTGTCGCCGGGATCCTGTACAAGTGGGTGAATTACGGGAAGGGGTGGAGATCGAGGTGGTTCGTGCTGGAAGATGGCGTGCTTTCTTATTACAAGATTCACGGGCCGGACAAGATCTTGATGAGTCCGGCGAGGGATAGGAGCGTGAGGGTGATCGGAGAAGAGTCATCGAAGTTCGTGAAGAAAGCGAATTGGAATCTGAATCGAGCGCCTTCTGGAGGGGCAGGGGGAGGGAACAGTAACAACGGGAAGCAATGCAAACCGTTCGGTGAGATACATTTGAAGGTTTCTTCAGTTCGTTCCAGCAAGTCTGACGAAAAGCGGCTTTCCATATTTACTGGGACAAAAACTCTCCACTTGCGGTGTGTATCTAGAGAAGACAGAGCCATGTGGATTGAGGCCTTGCAGTCAGCAAAAGATCTTTTTCCCAGAACTCTAACAAGTAGTGATCTTGCAACTTCAGAAGATATTGTGGTTTCCACAGAGAAGCTGCGATCACGATTGTCACAGGAAGGCATAAGTGAAGCAATCATTAATGACTGCGAGTCGATTATGCTTTCCGAAGTATCGTATCTCCAAAGCAAGTTGAAGTATCTTCAGCAGAAACATGTTATGCTGCTGGACACCTTAAAACAACTGGAGACAGAGAAAATAGAGTTGGAAACTACTGTAGTTGATGAAACAAAGGAACGGGAATCATACTGTGGACAAGGAAATAGAAGGTTTAGTGATTTTTATTCTGTGATGTCGGAGGGTAGTGCTACTGACTCGGTGGCTGATAATGAAAGTCAAGATGGAGCAGATGTTGAAACAGATGATGATGATAGAACATATTTTGACACAAATGAGTTTTTGTACTCTGATGCCCTAAGAAGTGCATCCTATCGAAGTAGGGAAGGTATGACCAATGGAAGTATATATGATAGAGATTATATTTGCTATGATGGTGTGCATGGGTTCGAGGAGATCAAAGATGTAAGGTATCCATATGTCAAAAGAAGAGATAACTTACCAGAGCCAAAAGAAAAAGAGAAGCCTGTTGGCTTGTGGTCAATTATTAAAGACAATATTGGGAAGGATCTTTCAGGAGTTTGTCTCCCTGTTTATTTTAATGAACCACTATCGTCATTGCAAAAGTGTTTTGAAGACCTAGAGTATTCATACCTGGTTGATAGAGCATTGGAATGGGGAAAGCAGGGGAATGATCTGATGAGAATTCTAAATATTGCAGCTTTTGCTGTATCCAGCTATGCATCAACTGAAGGTCGACAATGTAAACCTTTTAATCCTTTACTTGGGGAGACTTACGAAGCGGACTATCCAGATAAAGGACTTAGGTTTTTTTCTGAAAAGGTTAGTCATCATCCAATGATTGTTGCTTGTCATTGTGAGGGAAGGGGGTGGAAGTTTTGGGCAGATTCTAATTTGAAAGGAAAATTCTGGGGGCGTTCAATCCAGTTAGATCCTGTGGGTGTCCTGACTCTACAATTTGAGGATGGTGAAACATTTCAGTGGAGCAAGGTCACCACTTCCATATACAATATCATATTAGGTAAAATTTATTGTGACCACTACGGTACCATGCACATCAGGGGCAGTGGCAACTATTCTTGCAAACTGAAATTCAAGGAGCAATCTATTATAGACCGAAATCCACATCAGGTCCATGGATTTGTTCAAGACAACAGAACGGGAGAGAAGGTAGCAATGTTAATTGGGAAGTGGGATGAAGCAATGTACTATGTACTAGGGGATCCAACTACTAAGCCAAAAGGTTATGATCCGATGACAGAAGCTGCGATATTGTGGGAAAGGGACAGCTCTGTATCCAAGACAAGATACAACCTCTCTCCTTTTGCAATTTCCTTGAATGAAATATTACCTGGTTTATTAGACAAGTTGCCCCCGACTGACTCAAGGTTGAGACCAGATCAAAGACATTTAGAAAATGGAGAATATGAGTTGGCAAATGCAGAGAAACTGAGACTTGAGCAGTTGCAGAGACAGGCAAGAAAGATGCAAGAAAGAGGATGGCAGCCGAGATGGTTTAAGAAGGATGATGATGGTTGCTACCGATATATTGGTGGGTATTGGGAAACAAGAGAAAAAAATAATTGGGATGGAATCCCTGATATATTTGGACAGAGTTGTGATTTACCTTCATGTTCCACGGAAGAGACTGTATCCTACTGA 2460 0.4431 MNPLCCIAPVSIDRDRANPVVAKSPSQCQLGLDAAVRTVNYASKSSFSTLDSSVGSDSVKASAAADLEEEEEPRDSKAFGGGNGGGVAGSVAGILYKWVNYGKGWRSRWFVLEDGVLSYYKIHGPDKILMSPARDRSVRVIGEESSKFVKKANWNLNRAPSGGAGGGNSNNGKQCKPFGEIHLKVSSVRSSKSDEKRLSIFTGTKTLHLRCVSREDRAMWIEALQSAKDLFPRTLTSSDLATSEDIVVSTEKLRSRLSQEGISEAIINDCESIMLSEVSYLQSKLKYLQQKHVMLLDTLKQLETEKIELETTVVDETKERESYCGQGNRRFSDFYSVMSEGSATDSVADNESQDGADVETDDDDRTYFDTNEFLYSDALRSASYRSREGMTNGSIYDRDYICYDGVHGFEEIKDVRYPYVKRRDNLPEPKEKEKPVGLWSIIKDNIGKDLSGVCLPVYFNEPLSSLQKCFEDLEYSYLVDRALEWGKQGNDLMRILNIAAFAVSSYASTEGRQCKPFNPLLGETYEADYPDKGLRFFSEKVSHHPMIVACHCEGRGWKFWADSNLKGKFWGRSIQLDPVGVLTLQFEDGETFQWSKVTTSIYNIILGKIYCDHYGTMHIRGSGNYSCKLKFKEQSIIDRNPHQVHGFVQDNRTGEKVAMLIGKWDEAMYYVLGDPTTKPKGYDPMTEAAILWERDSSVSKTRYNLSPFAISLNEILPGLLDKLPPTDSRLRPDQRHLENGEYELANAEKLRLEQLQRQARKMQERGWQPRWFKKDDDGCYRYIGGYWETREKNNWDGIPDIFGQSCDLPSCSTEETVSY* 820
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra2g1447 819 Coils Coil 285 319 - -
Vra2g1447 819 Coils Coil 745 765 - -
Vra2g1447 819 ProSiteProfiles PH domain profile. 88 229 IPR001849 -
Vra2g1447 819 PANTHER OXYSTEROL-BINDING PROTEIN-RELATED 2 807 IPR000648 GO:0008289
Vra2g1447 819 SUPERFAMILY Oxysterol-binding protein-like 432 805 IPR037239 -
Vra2g1447 819 SUPERFAMILY PH domain-like 91 229 - -
Vra2g1447 819 MobiDBLite consensus disorder prediction 342 362 - -
Vra2g1447 819 Pfam Oxysterol-binding protein 438 791 IPR000648 GO:0008289
Vra2g1447 819 MobiDBLite consensus disorder prediction 63 77 - -
Vra2g1447 819 Gene3D - 734 799 - -
Vra2g1447 819 MobiDBLite consensus disorder prediction 61 82 - -
Vra2g1447 819 Gene3D - 523 690 - -
Vra2g1447 819 PANTHER OXYSTEROL-BINDING PROTEIN-RELATED PROTEIN 1D 2 807 - -
Vra2g1447 819 SMART PH_update 89 231 IPR001849 -
Vra2g1447 819 Pfam Pleckstrin homology domain 93 226 - -
Vra2g1447 819 Gene3D - 88 231 IPR011993 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra2g1447 Vra-Chr2 22528256 22535696 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra2g1447 K20456 - gmx:100788779 1576.99
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vra2g1447 2 22528256 22535696 Vra2g1447 2 22528256 22535696 ECH