Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra2g1437 ATGGCCTCGTATTATGATCAAAAACAAGGAAAGCCTTTACCTAAGTTTGGGGAATGGGATGTGAATGATCCTGCTTCAGCTGAAGGATTCACTGTTATATTCAACAAAGCCAGAGATGAAAAGAAAGTTGCCTCAGTCTCGGGACGATTCCCTTCTCAGCGAAAATACGATTCTCGAAAACGCAAGAATCAAAAAAAGAGCAAGAGTGCCTCTAACAACACAAAGAAAAAATGGTTTTGCTTTGGCCCTTAG 252 0.4087 MASYYDQKQGKPLPKFGEWDVNDPASAEGFTVIFNKARDEKKVASVSGRFPSQRKYDSRKRKNQKKSKSASNNTKKKWFCFGP* 84
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra2g1437 83 MobiDBLite consensus disorder prediction 43 83 - -
Vra2g1437 83 Pfam Cleavage site for pathogenic type III effector avirulence factor Avr 8 42 IPR008700 -
Vra2g1437 83 PANTHER RPM1-INTERACTING PROTEIN 4 (RIN4) FAMILY PROTEIN 1 81 IPR040387 -
Vra2g1437 83 PANTHER RPM1-INTERACTING PROTEIN 4 (RIN4) FAMILY PROTEIN 1 81 - -
Vra2g1437 83 MobiDBLite consensus disorder prediction 55 72 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra2g1437 Vra-Chr2 22474523 22475659 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra2g1437 - - vra:111240599 154.836