Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra2g1430 ATGGCACACGCTTTGTCCTCTAATCTGGCTCTTAACCTTCCCACATCGAGGTATCTTCTTCACTCCAGACCAACCCAGTTGAAGCCAGCGAGGTTCATGGTCATGGGAGATGCAAGAGAAAAGCTTGACCACATCCCAAAACCCAACAAGAACCACCATCCTCTTCCCAAGAAGAAAGCTGCCCCTGCTGCACCCATAGCAGGGTTGTGGGACAGGTTTCCTACGGCGAGAACAATGCAAGAGATGATGGAGACGATGGAGAGGATGATGGAGGACCCTTTTGCATTTAGCACGCTTGAGTGGCCTTCATCACCCTTACCGAGTGAGGGTGTGGGAGGGTACAGAAGAAGAGGAAGGGCACCATGGGAAGTGAAAGAGGGAGAGAGTGAGTACAAGATGAGGTTTGACATGCCTGGGATGAACAAAGAGGATGTGAAAGTCTGGGTGGAGGAAAAGATGCTTGTGGTTAAAGCAGAAAAGGCACCAAAGAAGAAAGAGATGGTTCAACAGGATCAACGGCCGAGGCAACCAGAAGAGGAAGAAGAAGAGGGATGGTCTGCAAAGAGCTATGGCAGGTATAGCAGTAGGATTGCTCTGCCCGACAATGTCCAGTTTGAGAATATTAAGGCTGAGGTTAAGGATGGTGTTCTCTACATAGCCATTCCCAAAGCTAATACTAGTTACTCCAACATCCTAGATATCCAAGTTCAATGA 714 0.486 MAHALSSNLALNLPTSRYLLHSRPTQLKPARFMVMGDAREKLDHIPKPNKNHHPLPKKKAAPAAPIAGLWDRFPTARTMQEMMETMERMMEDPFAFSTLEWPSSPLPSEGVGGYRRRGRAPWEVKEGESEYKMRFDMPGMNKEDVKVWVEEKMLVVKAEKAPKKKEMVQQDQRPRQPEEEEEEGWSAKSYGRYSSRIALPDNVQFENIKAEVKDGVLYIAIPKANTSYSNILDIQVQ* 238
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra2g1430 237 Pfam Hsp20/alpha crystallin family 124 237 IPR002068 -
Vra2g1430 237 PANTHER 26.5 KDA HEAT SHOCK PROTEIN, MITOCHONDRIAL 25 237 IPR044587 GO:0009408
Vra2g1430 237 SUPERFAMILY HSP20-like chaperones 103 235 IPR008978 -
Vra2g1430 237 ProSiteProfiles Small heat shock protein (sHSP) domain profile. 113 237 IPR002068 -
Vra2g1430 237 PANTHER 26.5 KDA HEAT SHOCK PROTEIN, MITOCHONDRIAL 25 237 - -
Vra2g1430 237 MobiDBLite consensus disorder prediction 162 187 - -
Vra2g1430 237 Gene3D - 68 236 IPR008978 -
Vra2g1430 237 CDD ACD_sHsps-like 123 223 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra2g1430 Vra-Chr2 22426684 22427974 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra2g1430 K13993 - gmx:100811966 322.398