Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra2g1428 ATGTTCAATAAGATATTCAGTAAACTCCCTCGGAAGTCATCGAGAGGTCCCGAACACGGTGGAAGTGGAAAAGGCCATCATGGCGTTACCACTTCTTCGAAGAGCAGTGATTCTGTTACTGTTTCCCAAGGTGGCACCAGACCGGGGAATTCTTCCGTTGCGGGGCAGAATCATGGTAACAGAGTTCCATTACCGAAGGTCTTGAATGAGAACAATATTCACAACAACCCCAATAACGGGATTTTGGCTTCCTATGAGGCATTGCCTGCATTCAGGGATGTTCCCTCTTCTGAGAAGACAACTTTGTTTGTGAAGAAGCTTATAATGTGTTCTGTGGTGTTTGACTTCACTGACCCCACCAAACACGTCAAGGAGAAGGAGATTAAGAGACAGACCTTGGTGGAACTCTTGGATTATGTGACTTCTGCGAATGCTAAGTTCGCGGAGAATGTGATGCTGGAGGTGGTGAAAATGGTGTCTGCAAACATATTCAGGACACTCAGTCCTCAGCCACGCGAAAATAAGATCGTTGATGGTGTTGATGTGGAGGAGGAGGAGCCTTCGATGGATCCTGCTTGGCCTCATTTGCAGATTGTGTATGAGCTTTTTCTGCGATTTGTGGCCTCACCTGAGCTGGATCCGAAATTGGCTAAGAGATACATTGATCAGTCCTTTATTTTGAAGCTGCTGGATTTGTTTGACTCCGAGGATCCGAGGGAGCGGGAGTACTTGAAGATGACTCTGCATCGTATCTATGGCAAATTCATGGCGCATCGCCCTTTCATCAGGAAGGCCATCAACAATGTGTTTTTCAATTTTATTTTTGAGACTGAGAAGCATAATGGGATTGCCGAATTCTTGGAAATTCTTGGGAGCATCATCAATGGTTTTGCCTTGCCATTGAAGGAAGAGCATAAACTGTTTCTTGTTCGCATCCTAATTCCTCTGCACAAGCCAAAATGCCTGGCAATGTATCATCAGCAGTTGTCGTATTGCATTACTCAGTTTGTGGAGAAAGACTGCAAACTTGCTGATACAATTATCAGGGGGCTGTTGAAGTACTGGCCCATAACAAATAGTTCAAAGGAAGTTATGTTCCTGGGTGAGTTAGAAGAAGTCTTGGAAGCAACTCAACCCCCAGAATTCCAGCGTTGTATGGTGCCATTGTTTCGTCGGATTGCCCGTTGTTTGAATAGCCCTCATTTTCAGGTGGCAGAAAGAGCTTTGTTCTTATGGAACAATGATCATATCGTGAACTTAATCAAGCAAAACAGAAAAGTGATACTGCCCATCATCTTCCCTGCATTGGAGAGAAATGCTAGAAGTCATTGGAACCAAGCTGTCCATAGTTTGACCTTAAATGTGCGGAAGATTTTTAATGATGTCGACGCTGATCTATCGAAAGAATGTTTACAAAAGTTTGAGGAAGACGAGTCAAAGGAAGATGAAGTCAAAGCAGGGCGTGAAGCCACGTGGAATCGGTTGGAAGAGCTTGCCATGAAGAAAGCTGCAAGTGGGGAAGCAGTGCTTATTGGTAAAGCACCAACTCGCCCCTCTGCAGGTTAG 1566 0.4483 MFNKIFSKLPRKSSRGPEHGGSGKGHHGVTTSSKSSDSVTVSQGGTRPGNSSVAGQNHGNRVPLPKVLNENNIHNNPNNGILASYEALPAFRDVPSSEKTTLFVKKLIMCSVVFDFTDPTKHVKEKEIKRQTLVELLDYVTSANAKFAENVMLEVVKMVSANIFRTLSPQPRENKIVDGVDVEEEEPSMDPAWPHLQIVYELFLRFVASPELDPKLAKRYIDQSFILKLLDLFDSEDPREREYLKMTLHRIYGKFMAHRPFIRKAINNVFFNFIFETEKHNGIAEFLEILGSIINGFALPLKEEHKLFLVRILIPLHKPKCLAMYHQQLSYCITQFVEKDCKLADTIIRGLLKYWPITNSSKEVMFLGELEEVLEATQPPEFQRCMVPLFRRIARCLNSPHFQVAERALFLWNNDHIVNLIKQNRKVILPIIFPALERNARSHWNQAVHSLTLNVRKIFNDVDADLSKECLQKFEEDESKEDEVKAGREATWNRLEELAMKKAASGEAVLIGKAPTRPSAG* 522
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra2g1428 521 MobiDBLite consensus disorder prediction 1 72 - -
Vra2g1428 521 Gene3D - 95 498 IPR011989 -
Vra2g1428 521 MobiDBLite consensus disorder prediction 26 58 - -
Vra2g1428 521 PANTHER SERINE/THREONINE PROTEIN PHOSPHATASE 2A REGULATORY SUBUNIT 1 519 - -
Vra2g1428 521 PANTHER SERINE/THREONINE PROTEIN PHOSPHATASE 2A PP2A REGULATORY SUBUNIT B 1 519 IPR002554 GO:0000159|GO:0007165|GO:0019888
Vra2g1428 521 SUPERFAMILY ARM repeat 101 481 IPR016024 -
Vra2g1428 521 PIRSF PP2A_B56 6 517 IPR002554 GO:0000159|GO:0007165|GO:0019888
Vra2g1428 521 Pfam Protein phosphatase 2A regulatory B subunit (B56 family) 88 499 IPR002554 GO:0000159|GO:0007165|GO:0019888
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra2g1428 Vra-Chr2 22414470 22419179 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra2g1428 K11584 - gmx:100811438 949.503