Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra2g1416 ATGTGGGGGCTTCTTCGAACTAGAACGTGTTTGCGATATTCAGAAGCCCTTCTTCTTCATCAACCATGGAAGAAGAAGGTGGGGTTCTGTTCTTTGTCCGCCGTTGACGGCCGTAATTGCCTCCTGGATCTGCCGGAGATCGAGAAGGTTCTGACGGATATCAAAGCTGACGACGTTAAGGTGATACCGGTTCCCAAGCACTGCGATTGGGCTGATTTCATGGTTCTCGCCACTGGCAGGTCCACCTGGCACGTCAGGAACATAGCCCAAGCCCTAATTTATAAGGCCAAACAGAAACAGAGAGGAGCTGAACGAATGATGCTACCGAGTGTAGAAGGGGAAGAGGGAGGAAAGTGGATAGTCATTGACTCTGGCAAAGTGATAGTTCATGCACTTGATGAAAAGGCCAGAGCTTACTACAATTTGGAGGGTCTTTGGACCCGAGGGACAATTCAAAATGAACCCGATGGGGATTTACAAAAAGCTTTGGTGAAGGTTCGTCGAAAAAACAATTCGAAGAAACCTGCACAAAAGAATGCTTAA 543 0.477 MWGLLRTRTCLRYSEALLLHQPWKKKVGFCSLSAVDGRNCLLDLPEIEKVLTDIKADDVKVIPVPKHCDWADFMVLATGRSTWHVRNIAQALIYKAKQKQRGAERMMLPSVEGEEGGKWIVIDSGKVIVHALDEKARAYYNLEGLWTRGTIQNEPDGDLQKALVKVRRKNNSKKPAQKNA* 181
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra2g1416 180 PANTHER IOJAP SUPERFAMILY ORTHOLOG 39 171 IPR004394 -
Vra2g1416 180 SUPERFAMILY Nucleotidyltransferase 46 152 IPR043519 -
Vra2g1416 180 Pfam Ribosomal silencing factor during starvation 46 146 - -
Vra2g1416 180 Gene3D Beta Polymerase, domain 2 43 157 IPR043519 -
Vra2g1416 180 PANTHER MITOCHONDRIAL ASSEMBLY OF RIBOSOMAL LARGE SUBUNIT PROTEIN 1 39 171 - -
Vra2g1416 180 TIGRFAM rsfS_iojap_ybeB: ribosome silencing factor 46 146 IPR004394 -
Vra2g1416 180 Hamap Ribosomal silencing factor RsfS [rsfS]. 34 147 IPR004394 -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra2g1416 - - var:108320297 357.451