LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Vra2g1415	ATGCCACCTTCTCCAGCATTGAGATTCTCTCCTGGGAGAGAGCCAAGAGCAGATGGTCACAAGCGTGGGCGCAGTCTTGAGAGTGGATTGCTCATCCGGGAGAAGGATGAGGATCTTACTTTGTTCAATGAAATGCAATCCAGAGAGAAGGAGAGCTTTTTGCTTCAGTTGACAGATGATTTGGAGGACTCATTCTCTACAAAGTTGAAACATATTTCTGATGTCAATCTTGCAATCTCCATTCCTGGCCGAGGAGAGAGCAGCGAGCTGCTTAATGATGGTGACAAGAATGATTACGACTGGTTATTAACGCCCCCAGACACACCACTGTTTCCTTCGTTAGATGATGAGCCATCGCTGACTAGTTTTGGAAGCAGAGGAAGGCCTCAGAGTAAACCGATTTCCATATCAAGATCTTCTACGATGGATAAAAGTCACAGAAGCAGTAGGGGCAGTGCAAGTCCAAATCGCTTAAGTCCATCCCCTCGATCAGCAGCTAACACATTGCAATCAAGGGGAAGACCTTCATCAGTGCCAAATTCCAGTCCATCCCCAAGTGTGCGATATGCCACTCCTTCCAGAAGACCATCTCCACCTCCAAGTAAGCCCATAACACCTGCTTCCAAGCATTCCACTTATACTCCCCGTAGGATAAGCACTGGCTCCAGTGGTTCTGGTGTCTCATCAGGAGTTAGGGGAACTTCTCCTGTGAAGACAAATCGTGGAAACTCTGCTTCACCAAAGATAAGGGCTTGGCAAACCAATATTCCTGGCTTCTCTTCTGAAGTTCCTCCCAATCTTCGTACTTCATTGGCTGATCGACCAGCATCATATGTGAGGGGTTCATCTCCAGCATCCAGAAATGGTAGGGACTCTGCTTCCAAATTCAATAGGCAATCAATGTCTCCAACTGCTTCTAGGAGCAGTAGCTCTTTTTACAGTCATGACAGAGACCAATTGAGCACACGCAGCAAAGGTTCCATTGCATCATCTGGTGACGACGATCTAGACTCTCTGCAATCGATCACAGTGGGTAGTGTAGACAGATTAAGTTCAAGAAGAGGTGCTTCACTTTCAACCAACAAAAATCCTACCATCTCCAAGAAATCAGCCAGGATTGTGTCCCCAAGTTCAGCTCCTAAAAGATCGTTTGATTCAGTTATCAGGCAAATGGATAGAAAAACTCCTCAGAACATGTTCAGGCCACTTCTATACAGTGTTCCAAGCACAACCTTTTATGCTGGAAAAGCAAATTCTGCACATCGTTCCCTTGTATCCAGGAATTCATCTGTTACAACAACAAGCAGCAATGCAAGCTCTGATCAAGGTACAACCTTTGCACTGGACACTGAAGGAAGTGAACATAATCAAGATGATATGACAAGTGAAGCTGATAAGATACTATATCCTGATATGCATGAAGTGTTTGTCTTTGATAAGGTTGATGCATTAAATGCAAAGATTGAGCAAGAGATTAAAAGGGAATCAGTACGTGTTCTGCAAAATGAAACCACAGACCCAAAGAATGTTTTAGTTCGAATTGGATTTGCGGATTCTATATCCCACATTCACATTGACACTAGAGTTAATGAAAGTTCAGAAATTTCACCAGTTAGAGGTGGTGTTTCGGACGCTGATAGTTTTGAAAATTCTGCTCGCTGTTCTTATTGTGGTTGTCGTTATGAGGTCACTAATCATGCTGAGAAGAATATTGGGCTGTGTCCAGAATGCAGCAGGAAAACCTCATTGTTGCGAGTCATCTTCCCTGAGACACCTTTGACAGTATCTGAAGACCCTCCATTGATTGAAGCCAACATTCCTCAAGAAGAAAAATCATTATCTGAAGCAAACCAATTGGAACTGCATGAAGAGACTAACGTGGGCAACTTAAGGTTTCCCTACGGTGAGCAGGATGCTGAGGAAAGTCAAACTTCTTGCAGTGAACTAAAGCAGGATCACTCACAAAATTCTTTGGGGGAGGGAGGCAGACAGACATCTGGCAACCAGCTAGAGATTAACCAATCAGGAGTTGATTACAATAAGCCTAATTATGAATTTGGGGATAAGCATCACTCAAGTGATCGCCCTAATTTGAATGTGGGCCCCACAGAAGGCACTGGCATTTCTCTATTGCTGAAAAGGACTAACAGCAATAAAGGGCCTGTAGTTCAGAGCAGGAGTTTTACTGCCACAACCTTATCTTACGATGATTTGTCTCTTGCTAGAGACAGTGTAAGCAGTTTTAGAAGCACAACAAGACCTGGTAGTTATTCTGCCTCATCATCAATTGATCTTGGCTCAACTAGGCAAACGGAGTTTCGTGTGCAAAGGCAGTTGAGTGCCAGGAAGCTGGATGTGGACTATGGATATGACTTGAGGATCAAGCCTCTAAGCACTGCTTCATCCTTTTCTGGAACTTCAAACCATTCTCGCCATGAGTTAGGTCTTGCAACTCAAGAGACAGGCAGTACAGAATATGGCTTTGTGGAGGAGGTATCTCAACTTTTTCAAGAAATGCCAGCTTTGGGAAACACGATGTCGGAGATAATTGATGCTTCTTCCATTGATTTAGTTGTTGAGGAAGATGAAGTTGAATGTGATGATAGTACTAGGTTGAATAATGCTTGCAGCTCAGAATTATCAAGTCAGGCTACTGTTGTCCAGTCTGATGAACTAGTCACATCAATTCCAAATCACGGGGATAGTGTGCCACACGAAAATGTTGATGATCGTCCAAATAATGCCAAGGGTGACTCAGACACAGAAACATCAGCTAAGACTCCAGAATTATCCAGTCAAGAGAAACATGATGTGCAGAATTCTGATGTTAATGAATTGGACGCTTTGGTCACAACCAACTGTCCCCCTATTACAGAAGCAGAAATAGAAGGAGAAAACTGTTGTGACAATATGGTTGACATGGTTAATGATGACCTGTCAAAGAGGGCCCTTGATGACTTTAGGGAACCTTCAGCTCAAAATCCTTCCAGTGATTCTTGTCCCGCTTCTGTTTCAGAGGTCAATGTCTCCGAGTCCCATGGCTTTGAGGGATCAACAGTTACAGTGGAGTGTCAAGGTGCAGGCAATACTAGGAGCTTGACTCTTGAAGAGGCAACAGACACAATCCTTTTTTGCAGTTCCATTGTGCAGGATCTTGCATATCAGGCTGCGACACTAGCAATGGAAAAGGAATGTTCCGACCCATTTGAGGGTTCTGAACCGACTGTGACCTTTTTGGGAAAATTCAATTCTGATAGAAATAGTCGCAGCCGCCCTGTCAGCAAGCGCACTTCAAAATCCCAGAAGACCAAGACCAAGCAGAGGAGGGTGGAAACTGATGTCAAAACCCCTTCTGGCAAGGCTGAGAATGATGAAAATATTGGTGAGTCTTTCACACACAATGTTGGGCTTCCTAACAAAGTAGATAGTATGAAGCCCCCAAAGCTGGAATCAAGGTGCAATTGCATCATAATGTGA	3477	0.4395	MPPSPALRFSPGREPRADGHKRGRSLESGLLIREKDEDLTLFNEMQSREKESFLLQLTDDLEDSFSTKLKHISDVNLAISIPGRGESSELLNDGDKNDYDWLLTPPDTPLFPSLDDEPSLTSFGSRGRPQSKPISISRSSTMDKSHRSSRGSASPNRLSPSPRSAANTLQSRGRPSSVPNSSPSPSVRYATPSRRPSPPPSKPITPASKHSTYTPRRISTGSSGSGVSSGVRGTSPVKTNRGNSASPKIRAWQTNIPGFSSEVPPNLRTSLADRPASYVRGSSPASRNGRDSASKFNRQSMSPTASRSSSSFYSHDRDQLSTRSKGSIASSGDDDLDSLQSITVGSVDRLSSRRGASLSTNKNPTISKKSARIVSPSSAPKRSFDSVIRQMDRKTPQNMFRPLLYSVPSTTFYAGKANSAHRSLVSRNSSVTTTSSNASSDQGTTFALDTEGSEHNQDDMTSEADKILYPDMHEVFVFDKVDALNAKIEQEIKRESVRVLQNETTDPKNVLVRIGFADSISHIHIDTRVNESSEISPVRGGVSDADSFENSARCSYCGCRYEVTNHAEKNIGLCPECSRKTSLLRVIFPETPLTVSEDPPLIEANIPQEEKSLSEANQLELHEETNVGNLRFPYGEQDAEESQTSCSELKQDHSQNSLGEGGRQTSGNQLEINQSGVDYNKPNYEFGDKHHSSDRPNLNVGPTEGTGISLLLKRTNSNKGPVVQSRSFTATTLSYDDLSLARDSVSSFRSTTRPGSYSASSSIDLGSTRQTEFRVQRQLSARKLDVDYGYDLRIKPLSTASSFSGTSNHSRHELGLATQETGSTEYGFVEEVSQLFQEMPALGNTMSEIIDASSIDLVVEEDEVECDDSTRLNNACSSELSSQATVVQSDELVTSIPNHGDSVPHENVDDRPNNAKGDSDTETSAKTPELSSQEKHDVQNSDVNELDALVTTNCPPITEAEIEGENCCDNMVDMVNDDLSKRALDDFREPSAQNPSSDSCPASVSEVNVSESHGFEGSTVTVECQGAGNTRSLTLEEATDTILFCSSIVQDLAYQAATLAMEKECSDPFEGSEPTVTFLGKFNSDRNSRSRPVSKRTSKSQKTKTKQRRVETDVKTPSGKAENDENIGESFTHNVGLPNKVDSMKPPKLESRCNCIIM*	1159

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Vra2g1415	1158	MobiDBLite	consensus disorder prediction	206	267	-	-
	Vra2g1415	1158	MobiDBLite	consensus disorder prediction	1076	1143	-	-
	Vra2g1415	1158	MobiDBLite	consensus disorder prediction	1123	1137	-	-
	Vra2g1415	1158	MobiDBLite	consensus disorder prediction	423	459	-	-
	Vra2g1415	1158	MobiDBLite	consensus disorder prediction	638	668	-	-
	Vra2g1415	1158	MobiDBLite	consensus disorder prediction	1104	1122	-	-
	Vra2g1415	1158	MobiDBLite	consensus disorder prediction	81	384	-	-
	Vra2g1415	1158	MobiDBLite	consensus disorder prediction	988	1017	-	-
	Vra2g1415	1158	MobiDBLite	consensus disorder prediction	903	917	-	-
	Vra2g1415	1158	MobiDBLite	consensus disorder prediction	637	668	-	-
	Vra2g1415	1158	MobiDBLite	consensus disorder prediction	895	944	-	-
	Vra2g1415	1158	MobiDBLite	consensus disorder prediction	13	29	-	-
	Vra2g1415	1158	MobiDBLite	consensus disorder prediction	118	191	-	-
	Vra2g1415	1158	MobiDBLite	consensus disorder prediction	281	384	-	-
	Vra2g1415	1158	PANTHER	RUN/FYVE DOMAIN PROTEIN	1	1158	-	-
	Vra2g1415	1158	MobiDBLite	consensus disorder prediction	423	451	-	-
	Vra2g1415	1158	PANTHER	GASTRIC MUCIN-LIKE PROTEIN	1	1158	-	-
	Vra2g1415	1158	MobiDBLite	consensus disorder prediction	990	1017	-	-
	Vra2g1415	1158	MobiDBLite	consensus disorder prediction	1	29	-	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Vra2g1415	Vra-Chr2	22308989	22315820	Dispersed/Wgd

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Vra2g1415	-		-	gmx:100794773	1689.09

Event-related genes

Select	Gene_1	Chr_1	Start_1	End_1	Gene_2	Chr_2	Start_2	End_2	Event_name
	Vra2g1415	2	22308989	22315820	Vra7g0910	7	20156238	20163190	PCT