Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra2g1411 ATGATGGTGCTGGCGAATTCTGGTTCGGGCCTTCGGAGACAGGTTTTTCCCGTGGACTATGAAACGGAGCTTTCGCAGCGTCTCGTAGAAGCGGCTTATTACGGCGACACCGAATCTGCGTTTGACTTTGTTGACAATCCCTCTGTCGACGTTAACTTCGTCGGGACGGTGTCGTTTAAGTTCAAAACGACGGAGATCGTGCTGCAGGACGAGTCGCCTCACCGAGTTAACTCGGCGTACGAGGAGTTCAAGACCGAACTCACCGCTCTGTTCCTGGCCGCGCACACAGGGAATTTGACACTTCTTCGGAAGCTTCTGAACGTTGGAGCTAATGTAAATATGAGAATGTTCCGGGGCTATGCCACAACAGCGTCAGTGAGAGAAGGGCATCTAAAAGTGTTGGAGGTCCTCATCAATGCTGGGGCATCACAACTTGCATGCGAGGAGGCTCTAATGGAAGCAAGCTATTTGGGCAGGGCCAGATTTGTTGAATTACTCATGCAATCCAACATGATTCGTCCTCAGGTTGCAGTTCATGCCCTTGTCTCTGCCTGTTGCAGAGGCTTCGTTGAGGTTGTTGATGTACTCATCAAGCATGGAGTGGATGCCAATGCAATTGATAGGACTTTGCTTCAATCTTCAAAGCCATTTCTTCATGCTAATGTCGATTGCAATGCATTATTTGCTGCTGTGGTCAGCAGGCAGATTGATGTTGTTAGATTACTGTTGCAGGTTGGAGTAAGGCTTGACATGAAGGTCAAACTGGGGGCTTGGTCCTGGGACACAGATACAGGAGAAGAATTTCGTGTAGGTGTTGGACTAGCTGAGGCCTATCCAATCACCTGGTGTGCCGTGGAGTATTTTGAGTCCACTGGTGCTATATTGCATATGCTGCTCTGCCATCTCTCACCTAATATCTTACACATTGGGAGGAGTCTCTTGCACCATGCTATCATCTGTAACAACGAAAGAGCTGTAAATATTCTTCTAAACAATGGTGCTGATACAGAAGTGACCGTGCAAACAACTGAAGAAACCAGTGAACGGGCTATTCACATTGTTGCACGGGTTGGATCATGCAACATTCTTCAGTGCCTGATTAATGGTGGTTGTAACTTGGATTCCCAGACAAAATGTGGAGATACAGCACTGATGATCTGCACAAGGCACAAACATGAGAAGTGCCTTGGGGTCCTAGCATCAGCAGGTGCTGATTTGGGAATGGTAAATTCATCTGACCAATGTGCAACTTCAATTGCAAACTTTGTTCAGTGGACTAAAGTCTACCAGAAAGTGATATTGGATGTAATCAGAGCAGGGAAGATTGTTAGATCAAGCAATGCCGCTAGATTCTCCGCATTGTTATTTGTAACTCGTGCAAATGACATGGAGGGTATGAAGAAACTCATTGAAAATGGGAACATAAATCTGAATGAGCAAAATGCAAACGGATTTTCTGCTGCTATGATAGCTGCTGTAGTGGGTAACGTGGAGGCTTTCAAGTTGCTTCTTTATGCAGGAGCTGACGTGACTAGGCTTAAAAACAAATATGGTTTGACAGCACTGAACCTCGTTGATGTGAGCCAAAACAGTGAAGCGTTCCACAAGGTGATGCTTGAATATGCACTTAAAGGGGGAGGCGATGGTTCAATCGAGGCAAACCCTCTCCACCGTGCAGCTTGCTACGGAGACATAAGTATTGTTCACAAACTACTAAAAGAGGGTTATGAAGTAAATGCTTTTGATGGTGAAGGATATACCCCTCTGATGTTAGCAGCAAGAGGGTGCCGTGGTGAAATGTGTGAGCTTTTGATCTCATATGGAGCTGAATGTGATATTCAGAATGAGAGACATGAGACAGCCCTTTCACTTTCCAGAGAAAATGGTGCAGGAAATGATGCTGAACGTGTGATTTTGGATGAGCTAGCTAGAAAACTGGTCTTGGGTGGACATCGTGTGAAGAAGCATACGAAGTGTGGCAAAGGTTCACCTCATGGTAAGTTCCTACAGATGATTGGTGCTGCTGGAATCTTACGTTGGGGAAAATCAAGTAAGAGAAATGTGATTTGTAAAGAGGCTGAGGTTGGGCCTAGTGTGAAATTTCGATGGAATCGTAGGAGGAAGTTTGATGTTGAGGAACCAGGATTGTTCCACGTTGTTACTACAAAAGATAAACAGGTACATTTTGTGTGTGAAGGTGGGATTGAAATGGCTGATTTGTGGGTAAGGGGGATTCAATTAGTAACTAGAGAAGCCATTTCTGGTAGAAGAGCTCCTGAGGTTTGA 2286 0.4545 MMVLANSGSGLRRQVFPVDYETELSQRLVEAAYYGDTESAFDFVDNPSVDVNFVGTVSFKFKTTEIVLQDESPHRVNSAYEEFKTELTALFLAAHTGNLTLLRKLLNVGANVNMRMFRGYATTASVREGHLKVLEVLINAGASQLACEEALMEASYLGRARFVELLMQSNMIRPQVAVHALVSACCRGFVEVVDVLIKHGVDANAIDRTLLQSSKPFLHANVDCNALFAAVVSRQIDVVRLLLQVGVRLDMKVKLGAWSWDTDTGEEFRVGVGLAEAYPITWCAVEYFESTGAILHMLLCHLSPNILHIGRSLLHHAIICNNERAVNILLNNGADTEVTVQTTEETSERAIHIVARVGSCNILQCLINGGCNLDSQTKCGDTALMICTRHKHEKCLGVLASAGADLGMVNSSDQCATSIANFVQWTKVYQKVILDVIRAGKIVRSSNAARFSALLFVTRANDMEGMKKLIENGNINLNEQNANGFSAAMIAAVVGNVEAFKLLLYAGADVTRLKNKYGLTALNLVDVSQNSEAFHKVMLEYALKGGGDGSIEANPLHRAACYGDISIVHKLLKEGYEVNAFDGEGYTPLMLAARGCRGEMCELLISYGAECDIQNERHETALSLSRENGAGNDAERVILDELARKLVLGGHRVKKHTKCGKGSPHGKFLQMIGAAGILRWGKSSKRNVICKEAEVGPSVKFRWNRRRKFDVEEPGLFHVVTTKDKQVHFVCEGGIEMADLWVRGIQLVTREAISGRRAPEV* 762
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra2g1411 761 PANTHER ANKYRIN REPEAT-CONTAINING 9 755 - -
Vra2g1411 761 SMART ANK_2a 379 408 IPR002110 GO:0005515
Vra2g1411 761 SMART ANK_2a 584 613 IPR002110 GO:0005515
Vra2g1411 761 SMART ANK_2a 222 251 IPR002110 GO:0005515
Vra2g1411 761 SMART ANK_2a 449 479 IPR002110 GO:0005515
Vra2g1411 761 SMART ANK_2a 85 114 IPR002110 GO:0005515
Vra2g1411 761 SMART ANK_2a 346 375 IPR002110 GO:0005515
Vra2g1411 761 SMART ANK_2a 176 205 IPR002110 GO:0005515
Vra2g1411 761 SMART ANK_2a 309 338 IPR002110 GO:0005515
Vra2g1411 761 SMART ANK_2a 483 512 IPR002110 GO:0005515
Vra2g1411 761 SMART ANK_2a 117 146 IPR002110 GO:0005515
Vra2g1411 761 SMART ANK_2a 551 580 IPR002110 GO:0005515
Vra2g1411 761 Gene3D - 539 645 IPR036770 -
Vra2g1411 761 SUPERFAMILY Ankyrin repeat 28 255 IPR036770 -
Vra2g1411 761 Gene3D - 431 538 IPR036770 -
Vra2g1411 761 ProSiteProfiles Ankyrin repeat profile. 483 515 IPR002110 GO:0005515
Vra2g1411 761 ProSiteProfiles Ankyrin repeat region circular profile. 309 338 - -
Vra2g1411 761 ProSiteProfiles Ankyrin repeat region circular profile. 584 616 - -
Vra2g1411 761 Gene3D - 306 430 IPR036770 -
Vra2g1411 761 ProSiteProfiles Ankyrin repeat profile. 584 616 IPR002110 GO:0005515
Vra2g1411 761 ProSiteProfiles Ankyrin repeat region circular profile. 551 582 - -
Vra2g1411 761 SUPERFAMILY Ankyrin repeat 310 636 IPR036770 -
Vra2g1411 761 ProSiteProfiles Ankyrin repeat profile. 551 583 IPR002110 GO:0005515
Vra2g1411 761 Gene3D - 17 176 IPR036770 -
Vra2g1411 761 Pfam Ankyrin repeats (3 copies) 539 615 IPR002110 GO:0005515
Vra2g1411 761 Gene3D - 177 262 IPR036770 -
Vra2g1411 761 PANTHER ANKYRIN DOMAIN PROTEIN 9 755 - -
Vra2g1411 761 ProSiteProfiles Ankyrin repeat profile. 85 117 IPR002110 GO:0005515
Vra2g1411 761 ProSiteProfiles Ankyrin repeat region circular profile. 85 115 - -
Vra2g1411 761 ProSiteProfiles Ankyrin repeat region circular profile. 483 510 - -
Vra2g1411 761 ProSiteProfiles Ankyrin repeat profile. 309 341 IPR002110 GO:0005515
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra2g1411 - - gmx:100795638 1342.79