Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra2g1409 ATGCCACAGCCAGAAAAATCGCTCGGTAACAACCTTCCAATAATTCGCATTCCAGGAGACGGTAGATGTTTGTTTAGGGCTGTGGTCTACGGTGCATGCCTCAGATCAGGTGAACCGTCTCCAAGTCTTAGTAGGCAAAGAGAACTTGCAGATGAACTTAGAGCCAAAGTTGTTGATGAATTCATCAAGAGGAGGGCAGACACAGAATGGTTTCTAGAAGGTGATTTTGAGACGTATACTATACAGATGCGAAAGCCCCACATATGGGGAGGAGAACCTGAGCTTCTAATGTCCTCACATGTTTTACAGATGCCAATAACAGTGGTAATGCAGGATAAGAATTCGAGTAACCTTAAAGTTATAGCTGAATATGGCGAGGAATATGGGAAGGACAACCCTATTGGAGTGATTTATGATGGTTATGGTCACTACGATGCATTATTGAAGAGCAGTCTTAGCTAG 462 0.4329 MPQPEKSLGNNLPIIRIPGDGRCLFRAVVYGACLRSGEPSPSLSRQRELADELRAKVVDEFIKRRADTEWFLEGDFETYTIQMRKPHIWGGEPELLMSSHVLQMPITVVMQDKNSSNLKVIAEYGEEYGKDNPIGVIYDGYGHYDALLKSSLS* 154
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra2g1409 153 PANTHER OS09G0487700 PROTEIN 13 148 - -
Vra2g1409 153 Pfam OTU-like cysteine protease 18 140 IPR003323 -
Vra2g1409 153 Gene3D - 3 152 - -
Vra2g1409 153 PANTHER OTU DOMAIN CONTAINING PROTEIN 13 148 - -
Vra2g1409 153 SUPERFAMILY Cysteine proteinases 11 149 IPR038765 -
Vra2g1409 153 ProSiteProfiles OTU domain profile. 12 150 IPR003323 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra2g1409 Vra-Chr2 22267348 22268972 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra2g1409 K18342 - gmx:100792132 296.589