Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra2g1390 ATGAAGAGCCGTTATCCGTTACAGGAGAAACGGTGGTTGCTGGGCTTGGCCGTGGTGGGCCTGATTGTCCTTGGGTTTTTCCTCTCAACCGCAGGCCGATCTTCGGAAACCGCCTATCTGTGTCCGAGCACGCTCGGGATCCGAACCCGAAAAGAATTCAATTACGACCCGGCACCGATCCAGACGCGCGCCATTCTCCACTACGCCACCTCGCGCGTGGTGCCGCAGCAATCGGTGGCAGAGATCAAGATCAGTCTGGACGTGATAAAGTCACTGGGCCGGCCATGCAACTTCCTTATCTTTGGGCTGGGCCACGATTCCCTCATGTGGGCCTCGTTCAACCCGGGGGGCACCACGGTGTTCCTGGAGGAGGATCCTAAGTGGGTCCACTCGATCTTGAAAGACGCACCGGGCCTGCGCGCTCATACGGTCCGTTACCGTACGCAGCTTCGCGACGCCAATACGCTGCTCAGCTCGTACCGCTCCGAAGCCACGTGCTCTCCTGCGACGGCGTACCTTCGTGGCAACCAAGCGTGCAAGCTGGCGCTGGAGAATCTCCCCAACGAGGTTTACGAGACGGAGTGGGACATGATCATGATCGACGCGCCCAAGGGGTACTTCGCGGAGGCGCCGGGGCGGATGTCGGCGGTGTTCTCGGCCGCTGTGATGGCGCGTAACCGGAAGGAAGGCGGTGTGACGCACGTGTTCTTGCATGACGTGGATCGCAAGGTGGAGAAGGTTTACGCGGAAGAGTTTCTGTGTAAGAAGAACTTGGTGAATGGTGCTGGAAGGCTTTGGCATTTTCAGATTCCTCCTTCTAACGACACCCTTTCTTCTAGTTTCTGCTAG 849 0.5842 MKSRYPLQEKRWLLGLAVVGLIVLGFFLSTAGRSSETAYLCPSTLGIRTRKEFNYDPAPIQTRAILHYATSRVVPQQSVAEIKISLDVIKSLGRPCNFLIFGLGHDSLMWASFNPGGTTVFLEEDPKWVHSILKDAPGLRAHTVRYRTQLRDANTLLSSYRSEATCSPATAYLRGNQACKLALENLPNEVYETEWDMIMIDAPKGYFAEAPGRMSAVFSAAVMARNRKEGGVTHVFLHDVDRKVEKVYAEEFLCKKNLVNGAGRLWHFQIPPSNDTLSSSFC* 283
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra2g1390 282 PANTHER OS11G0490100 PROTEIN 1 282 IPR006514 GO:0045492
Vra2g1390 282 Pfam Polysaccharide biosynthesis 80 268 IPR021148 -
Vra2g1390 282 TIGRFAM A_thal_3515: uncharacterized plant-specific domain TIGR01627 63 282 IPR006514 GO:0045492
Vra2g1390 282 PANTHER POLYSACCHARIDE BIOSYNTHESIS PROTEIN 1 282 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra2g1390 Vra-Chr2 22151581 22152761 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra2g1390 - - gmx:100791951 485.337