Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra2g1389 ATGAAGCGGCAGAGCAGAGTGTTCGCGGTGATGTTCGTGGTGGTTATGGCATCGTGTGGGTGGATGAAGGTGGCGGAAGGCGATGATTTATCGACCAAGTGCGCGTCGGCGATTGAGAAGGTTCCTCCGTGTTTGACTTTCGCGACGGGGAAGAAAGATATACCGAGCGACGATTGCTGCGCCGCAACTTTAAGCATAAAGCAGAGCAACCCAGAGTGTTTGTGTTACATCATTGAACTGACTCACAAGGGTAGCCCACAGGTCAAAGAGCTGGGTATTCAAGAGGACAAGTTGCTTCAACTCCCTTCCGCTTGCCACATGAAGAACGCCAGCATCACCGACTGTCCCAAGCTTCTGGGTCTATCACCAAGTTCCCCTGATGCAGCAATCTTCACGAACTCTTCGAAGGTAACGCCTGCAACATCAAACACACCAAGTACGACCCCACAAAGCCAAAACGCTTCGCATGGAAGTGTGGTTATACCTAGTATGCCGATGATGATAAGTTTGACCGTTGTTGTGGCTGCAATTTCACCTGTTTTTGTGAGCATTTATACATGA 561 0.4973 MKRQSRVFAVMFVVVMASCGWMKVAEGDDLSTKCASAIEKVPPCLTFATGKKDIPSDDCCAATLSIKQSNPECLCYIIELTHKGSPQVKELGIQEDKLLQLPSACHMKNASITDCPKLLGLSPSSPDAAIFTNSSKVTPATSNTPSTTPQSQNASHGSVVIPSMPMMISLTVVVAAISPVFVSIYT* 187
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra2g1389 186 PANTHER BIFUNCTIONAL INHIBITOR/LIPID-TRANSFER PROTEIN/SEED STORAGE 2S ALBUMIN SUPERFAMILY PROTEIN-RELATED 8 159 IPR043325 -
Vra2g1389 186 CDD AAI_LTSS 43 107 - -
Vra2g1389 186 SMART aai_6 34 115 IPR016140 -
Vra2g1389 186 Gene3D - 31 112 IPR036312 -
Vra2g1389 186 ProSiteProfiles Prokaryotic membrane lipoprotein lipid attachment site profile. 1 19 - -
Vra2g1389 186 PANTHER NON-SPECIFIC LIPID TRANSFER PROTEIN GPI-ANCHORED 1 8 159 - -
Vra2g1389 186 Pfam Probable lipid transfer 16 115 IPR016140 -
Vra2g1389 186 MobiDBLite consensus disorder prediction 135 156 - -
Vra2g1389 186 SUPERFAMILY Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin 33 115 IPR036312 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vra2g1389 33 181 Acyl Lipid Metabolism Gene Families AT1G27950 46.667 3.90e-43 140
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra2g1389 - - gmx:100305718 218.009