Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra2g1386 ATGGAAGGGGTGGCCATGCTGAAGCAGCTAATTGGTCAGCTTCAGCAGCTATTGGACTCTTCCCATTCCCATTCTCTCATTCTTCAACCTTCAAACCACACTCTCTTCTTTCAACAACAGCAACAGCAACAAAGCAGATGGACATCCTTTGACGTTGAAGATAGCTCTGTAGATGACTTTTGTGGCCTAGTAGTGACAGCAGGAAAGTCTGGCAGTTTCAGGATGTCAGAGCCTGTGAAGTCTCCACCTACTAAGAAGTCTCGTAGAGATAGAAGCAGGGGCAAATCATCTGGACGATCCTGTTCAACTGAAGTTATGGAACAAGAAATTTGGAAAGATTTTCCTGAAGATTTATTTGAGGCTGTGATAGCACGACTTCCCATTGCTACCTTTTTCCGCTTCCGCTCTGTCTGCCGGAAGTGGAATTCCATGCTTACTTCTCAAAGTTTTTCTCAGTATTGTACTCAAGTTACACAAGCAAATCCATGGTTTTACACCATTACCCATGAAAATGTGAATTCGGGAGCTATGTACGACCCTTCTCTGAAAAAATGGCACCACCCAACTATATCGACACCACCCACAAAATTGATTGTTTTACCCGTGGCTTCTGCCGGTGGTTTAGTTTGCTTTCTTGACATTGGTCATCGTAACTTCTTTGTTTGCAACCCACTGACTCAATCCTTCAGGGAGTTGCCAGCTCGATCAGTTAAGGTCTGGTCTCGGGTTGCTGTAGGGATGACAATTAATGGAAACTCGGCTGGTTCAGGATACAAGATCTTATGGGTTGGTTGTGATGGAGAATATGAAGTTTACGACTCAGTCAGAAATTCTTGGATTCGTCCTGGAAACATGCCTGCAGGTATGAAGCTGCCACTGTCGCTCAACTTTAGGTCTCAAGCTGTCTCTATTGATAGCATGCTTTACTTCATGCGATCAGACCCAGAAGGGATTGTATCTTACGATATGGTAACTGGGGTTTGGAAACAATATATAATCCCAGCGCCATTGCATCTGACTGATCACACTCTGGCCGAGTGTGATGGCCAGATCATGCTTGTGGGTTTGCTCACAAAGAATGCAGCTACTTGTGTATGCATATGGGAGCTGCAGAAAATGACACTCTTGTGGAAGGAGGTTGACAGAATGCCAAACATATGGTGCTTGGACTTTTATGGGAAGCACGTTAGAATGACATGCCTGGGGAACAAAGGCTTGCTCATGTTGTCCTTGAGATCGAAACAAATGAATAGATTGGTTACTTACAACATAGCAAGGAAAGAATGGCTGAAGGTTCCTGGGTGTGTGGTGCCGCGTGGGAGAAAAAGACAGTGGATAGCTTGTGGTACTGCATTTCATCCATGCCTGACAGCGGTGGCATGA 1383 0.4505 MEGVAMLKQLIGQLQQLLDSSHSHSLILQPSNHTLFFQQQQQQQSRWTSFDVEDSSVDDFCGLVVTAGKSGSFRMSEPVKSPPTKKSRRDRSRGKSSGRSCSTEVMEQEIWKDFPEDLFEAVIARLPIATFFRFRSVCRKWNSMLTSQSFSQYCTQVTQANPWFYTITHENVNSGAMYDPSLKKWHHPTISTPPTKLIVLPVASAGGLVCFLDIGHRNFFVCNPLTQSFRELPARSVKVWSRVAVGMTINGNSAGSGYKILWVGCDGEYEVYDSVRNSWIRPGNMPAGMKLPLSLNFRSQAVSIDSMLYFMRSDPEGIVSYDMVTGVWKQYIIPAPLHLTDHTLAECDGQIMLVGLLTKNAATCVCIWELQKMTLLWKEVDRMPNIWCLDFYGKHVRMTCLGNKGLLMLSLRSKQMNRLVTYNIARKEWLKVPGCVVPRGRKRQWIACGTAFHPCLTAVA* 461
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra2g1386 460 ProSiteProfiles F-box domain profile. 108 153 IPR001810 GO:0005515
Vra2g1386 460 PANTHER BNAA07G08860D PROTEIN 50 459 - -
Vra2g1386 460 Gene3D - 111 147 - -
Vra2g1386 460 MobiDBLite consensus disorder prediction 72 101 - -
Vra2g1386 460 PANTHER F-BOX/KELCH-REPEAT PROTEIN 50 459 - -
Vra2g1386 460 SUPERFAMILY F-box domain 106 186 IPR036047 GO:0005515
Vra2g1386 460 Pfam F-box domain 111 150 IPR001810 GO:0005515
Vra2g1386 460 SMART fbox_2 114 154 IPR001810 GO:0005515
Vra2g1386 460 Gene3D - 148 448 IPR015915 GO:0005515
Vra2g1386 460 SUPERFAMILY Galactose oxidase, central domain 175 441 IPR011043 -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra2g1386 - - gmx:100810179 820.076