Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra2g1382 ATGTTGGACTGTGGGCCAGTGGTTGTGTCTGTGGTGCTATACATTCTGCTAATGCCAGGGTTGCTATTTCAAGTACCTGGTCGTTCAAGGTGCGTCGAGTTTGGAAATTTTCAGACCAGTGCTGCTTCCATACTCGTTCATTCGCTTCTCTACTTTGGTCTCATCTGCCTCTTCTTGTTCGCTGTTAAGGTCCACTTTTACATCGGCTAG 210 0.4714 MLDCGPVVVSVVLYILLMPGLLFQVPGRSRCVEFGNFQTSAASILVHSLLYFGLICLFLFAVKVHFYIG* 70
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra2g1382 69 Pfam Protein of unknown function (DUF3339) 1 67 IPR021775 -
Vra2g1382 69 PANTHER OS05G0103400 PROTEIN 1 69 IPR021775 -
Vra2g1382 69 PANTHER PROTEIN, PUTATIVE-RELATED 1 69 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra2g1382 Vra-Chr2 22102939 22106162 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra2g1382 - - var:108319023 136.346