Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra2g1329 ATGGCGTTTACTCTCTCTCCCTCCTTTAACCTTTCCCTCACTCGTAACCGAATCACCTGCTTCTCCAAGGAGCACCGCCGCCAAGTCATCGCAAAGGAAGCGGTAGGAGACGCGACGCGTGCCATGTCTGCGAGTGTTGTGGAGAGGATAATGAAACGGTTGAGGAGTGTGGTTCCGATGGTGATTGCGTCCGTTCAGATTAGCGCTTTGGTGCCGTTGATTGATTACGTGCCGTTAACCGGTGCTGCCGAAGCAGTTTTGTATTCGCCTGATACGAAGGTTCCGAGAACCGGGGAGGTTGCTCTCAGAAGAGCCATCCCTGCCAATGCTAATATGAAGTCTATACAGGACACTCTTGAAGATATTACGTACCTTTTGAGGATTCCACAGAGAAAACCTTATGGAACAATGGAGGGGAATGTGAAGAAAGCTTTGAAGTTAGCAGTTGATGAAAAGGATTCTATATTGGCCAGTATACCAGCAGAACTGAAGATAAAGGGATCTTTGGTACATGCATCCCTGATAGAGGGAAAGGGGTGCTTGCAAACTCTTCTTCAATCTATAAAGGAACAGGATGCAGATAAAGTATCTGTGAACCTTGCATCTACACTGGACACTGTAGCAGAGCTAGAGTTGTTACAGGCTCCAGGATTATCTTTTTTGTTGCCCGAACAATATGCACAACAATATCCACGGCTTTCTGGGAGAGGAACTGTCGAGTTCACCATTGAGAAAGGAGATGGTTCAACATTTTCCCCAGTTGGTGGAGAGCAGAAAAATACAGCCACTATTCAGGTTGTTATTGACGGATACTCTGCTCCATTAACTGCAGGAAATTTTGCAAAACTGGTGATGGATGGAGCCTATAATGGCGCAAAACTCAACTCTGTCAACCAAGCTATTCTCTCAGATAATGGAGGTGATAAGAGCAGTGGTTACAGTGTTCCCTTGGAAATAATGCCCTCTGGACAATTTGAGCCCCTTTACAAAACAACATTAAGTGTGCAGGATGGAGAACTGCCAGTTCTTCCTCTATCTGTTTATGGGGCAGTTGCTATGGCTCATAACGAAGCCTCTGAAGAATATTCATCACCTTACCAGTTCTTCTTCTATCTCTACGATAAACGAAGTGCTGGTTTGGGAGGAATATCATTTGATGAAGGACAATTTTCAGTTTTTGGATACACAACCACCGGGAGAGATATACTTCCCCAGATAAAAACTGGTGATATTATTCGTTCTGCAAAGCTAATTGAAGGCCAAGACCGTCTTGTATTACCGAAGGAAAGTTGA 1293 0.4478 MAFTLSPSFNLSLTRNRITCFSKEHRRQVIAKEAVGDATRAMSASVVERIMKRLRSVVPMVIASVQISALVPLIDYVPLTGAAEAVLYSPDTKVPRTGEVALRRAIPANANMKSIQDTLEDITYLLRIPQRKPYGTMEGNVKKALKLAVDEKDSILASIPAELKIKGSLVHASLIEGKGCLQTLLQSIKEQDADKVSVNLASTLDTVAELELLQAPGLSFLLPEQYAQQYPRLSGRGTVEFTIEKGDGSTFSPVGGEQKNTATIQVVIDGYSAPLTAGNFAKLVMDGAYNGAKLNSVNQAILSDNGGDKSSGYSVPLEIMPSGQFEPLYKTTLSVQDGELPVLPLSVYGAVAMAHNEASEEYSSPYQFFFYLYDKRSAGLGGISFDEGQFSVFGYTTTGRDILPQIKTGDIIRSAKLIEGQDRLVLPKES* 431
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra2g1329 430 Gene3D - 108 213 IPR023222 -
Vra2g1329 430 Pfam Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD 262 411 IPR002130 GO:0000413|GO:0003755
Vra2g1329 430 ProSiteProfiles Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain profile. 251 407 IPR002130 GO:0000413|GO:0003755
Vra2g1329 430 SUPERFAMILY Cyclophilin-like 263 414 IPR029000 -
Vra2g1329 430 Gene3D - 256 421 IPR029000 -
Vra2g1329 430 PANTHER PEPTIDYL-PROLYL CIS-TRANS ISOMERASE CYP37, CHLOROPLASTIC 25 429 IPR044259 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra2g1329 Vra-Chr2 21169851 21178140 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra2g1329 - - gmx:100806701 728.783