Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra2g1326 ATGGAGGAAGACAAGTACGCCAAGGAATTGGAGGTGGCCGTCAGGGTGGTCCACGTGGCGTGTGCTCTGTGCGGGAGGGTGCAGGAGAGGCTCCTTGAGACCAGCAATGATCACGTTCTGTCCAAGGATGATGATTCTCCTGTTACTGTTGCAGACTTTAGTGTTCAAGCAACCATTAGTTGGTTATTATCAGAAATATTTGGAGTTCAAAACGTATCAATTGTGGCCGAAGAAGACATACAAACCATCTCAAAGGATGAATCAGCAAGCTTGCTGGATAATGTTGTGAACACTGTGAATGAGTCTTTAGCTTTTGCATCCAAGTATGGTCTTCAAAGTCCAGAGACAACTCTAGGATCAACTGAAATTCTTGAGGCCATTTCCCGTTGCAACTCAACTGGAGGCCCCAGTGGAAGATATTGGGTACTTGATCCTGTTGATGGCACATTAGGATTTGTACGTGGGGATCAGTATGCTGTTGCTCTAGCTCTGATTGAAGATGGAAAAGTTGTTCTTGGAGTTCTTGGTTGTCCTAACTACCCAGTAAAGACAGAATGGCTTAATTATCATTACCAGCATCACCAAACAATGGCGCAATCGTCTCAAATAACTCCTGATACCGGAGGAAAAGGATGCGTATTGTATGCAAAAAGTGGCAGTGGCGAGGCATGGTTGCAGTCATTGATTGATGGAGAGAAAATGCTGGAATGGCCAAATCGTGCTAGACTTATTCGTGTTTCTTCAATTGACGATCCGGCATTGGCAACTCTCTGTGAACCAGTGGAAAGGGCAAACTCAAACCATTCATTCACAGCTGGACTTGCTCACAGTGTGGGACTTAGAAAACAGCCCTTGCGTGTGCACAGCATGGTAAAATATGCAGCAATAGCACGAGGAGATGCAGAGATATTCATGAAATTTGCCAAATGTGGATACAAGGAGAAGATATGGGATCATGCTGCTGGTGTTGTGATTGTTGAAGAGGCTGGTGGTGTGGTAACTGATGCTGGAGGGCGCCCTCTGGACTTTTCCAAGGGCATGTACTTAGAAGGTCTTGACAGAGGTATAATTGCATGCTCTGGTGTAACACTGCATGAAAAATTTATTGCTGCTGTTTATGCAAGCTGGGACTCCTCAAATTTATGA 1146 0.4503 MEEDKYAKELEVAVRVVHVACALCGRVQERLLETSNDHVLSKDDDSPVTVADFSVQATISWLLSEIFGVQNVSIVAEEDIQTISKDESASLLDNVVNTVNESLAFASKYGLQSPETTLGSTEILEAISRCNSTGGPSGRYWVLDPVDGTLGFVRGDQYAVALALIEDGKVVLGVLGCPNYPVKTEWLNYHYQHHQTMAQSSQITPDTGGKGCVLYAKSGSGEAWLQSLIDGEKMLEWPNRARLIRVSSIDDPALATLCEPVERANSNHSFTAGLAHSVGLRKQPLRVHSMVKYAAIARGDAEIFMKFAKCGYKEKIWDHAAGVVIVEEAGGVVTDAGGRPLDFSKGMYLEGLDRGIIACSGVTLHEKFIAAVYASWDSSNL* 382
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra2g1326 381 SUPERFAMILY Carbohydrate phosphatase 6 374 - -
Vra2g1326 381 PANTHER PHOSPHATASE 1 381 - -
Vra2g1326 381 CDD PAP_phosphatase 9 374 - -
Vra2g1326 381 Gene3D - 245 375 - -
Vra2g1326 381 ProSitePatterns Inositol monophosphatase family signature 1. 141 154 IPR020583 -
Vra2g1326 381 ProSitePatterns Inositol monophosphatase family signature 2. 317 331 IPR020550 GO:0046854
Vra2g1326 381 Pfam Inositol monophosphatase family 44 376 IPR000760 GO:0046855
Vra2g1326 381 PANTHER PAP-SPECIFIC PHOSPHATASE HAL2-LIKE 1 381 - -
Vra2g1326 381 TIGRFAM bisphos_HAL2: 3'(2'),5'-bisphosphate nucleotidase 6 380 IPR006239 GO:0006790|GO:0008441
Vra2g1326 381 Gene3D - 4 235 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra2g1326 Vra-Chr2 21133358 21145272 Dispersed/Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra2g1326 K01082 - gmx:100814009 706.057
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vra2g1326 2 21133358 21145272 Vra2g1326 2 21133358 21145272 ECH