Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra2g1323 ATGAGTATCTCAAGTAGAAATAGTTTGATCTATCTCTTTCTCTTGTTTGCATTCTGTGAAATGCAAATTATTGTAGGAAAAGACAGCCAGACCTGCATCTCCCGCAAGAGTCGATGCTTTGGAAAGAAAGTGCCATGCCCGAATGAATGCCCTTATAAATTTCCATCCGATTCAAAGGCCAAAGTCTGCTATCTTGACTGTGATTCCCCCGTTTGCAAAACTCAATGCAAAACTCGCAAACCAAATTGCAATGGTCGTGGATCTGCATGTCAGGACCCTCGTTTTGTTGGAGCAGATGGAATTGTTTTCTACTTCCATGGAAGGAGAAACGAGCAATTCGCATTAGTATCCGATGTGAACCTTCAAATCAATGCACGTTTCATTGGCCTAAGGCCAGCAAGTAGAACAAGGGACTACACTTGGATCCAAGCATTGGGAGTTCTCTTTGATTCGCACAAGTTCACCATTGAGGCCACCCCAGCAGCATCATGGAACGATGAAGTTGACCACTTGAAGTTTTCTCACAATGGCAAAGAACTTGCCATCCCTGATGGTTACCTCTCCGCATGGCAGTGCCCACAAAATCAAGTTAGAATAGAGAGAACATCAAGCAAGAACAGTGTTACCATTACTCTCCCAGAAGTTGCTGAGATATTAGTGAATGTTGTGCCTGTCACTAAGGAAGATAGTAGAATCCACAACTACGAAATTCCTGAGGATGATTGCTTTGCTCACTTAGAAGTGCAGTTCAAATTCCATGGTTTGAGTTCAAAAGTTGAAGGGGTTCTTGGAAGGACTTATCAGCCAGATTTTGAGAATCCAGCAAAGTTGGGAGTGCCAATGGCAGTGGTTGGAGGGGAAGACAAGTACAGAACCACATCACTTGTTTCTGCAGATTGTGGGGTCTGTTTGTTTGATAGTGCAAAAGAAGCTTCAGAGAAAATTAACTCAGTGACTGAATACAGTTTGCTGGATTGCACTGGTGTGGCCAACAGTGGGAATGGCATAGTTTGCAGAAGATGA 1023 0.434 MSISSRNSLIYLFLLFAFCEMQIIVGKDSQTCISRKSRCFGKKVPCPNECPYKFPSDSKAKVCYLDCDSPVCKTQCKTRKPNCNGRGSACQDPRFVGADGIVFYFHGRRNEQFALVSDVNLQINARFIGLRPASRTRDYTWIQALGVLFDSHKFTIEATPAASWNDEVDHLKFSHNGKELAIPDGYLSAWQCPQNQVRIERTSSKNSVTITLPEVAEILVNVVPVTKEDSRIHNYEIPEDDCFAHLEVQFKFHGLSSKVEGVLGRTYQPDFENPAKLGVPMAVVGGEDKYRTTSLVSADCGVCLFDSAKEASEKINSVTEYSLLDCTGVANSGNGIVCRR* 341
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra2g1323 340 PANTHER ROOT CAP DOMAIN-CONTAINING PROTEIN 5 340 - -
Vra2g1323 340 PANTHER LATE EMBRYOGENESIS ABUNDANT (LEA) PROTEIN-LIKE PROTEIN 5 340 - -
Vra2g1323 340 Pfam Root cap 249 305 IPR009646 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra2g1323 Vra-Chr2 21071228 21073048 Proximal
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra2g1323 - - gmx:100808294 585.104
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vra2g1323 2 21071228 21073048 Vra2g1323 2 21071228 21073048 ECH