Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra2g1318 ATGGAGATCACCAAAATCATAATTGCTGTGTTATTGTTTGTGTCATGTTTGAGTGTGCAGGCCAATGCATACTATTACAGGCAATGTAGCACCAAAGGAACTCGATGCTATGGAAAATATATTAGATGTCCGAATGAGTGTCCCAGCAGTGAATCAACAGATCCTAAGGCTAAGGTTTGTCATATTGATTGCGACAAACCCATATGCAGAGCAGTATGCAGAAGTCGCAAACCAAACTGCAATGCACCAGGATCAGGTTGCTACGATCCCCGTTTCATTGGTGGGGATGGAAGAGTGTTCTACTTCCATGGAAAGAGCAACGAACACTTCTCCTTAGTATCAGACTCCTCCCTTCAAATCAATGCTCGCTTCATTGGACACAGGCCAGCAGGTAGAGCCAGAGACTACACATGGATTCAAGCCCTTGGAATCCTCTTCAACTCCAAAAGCTTATCACTTGAAGCACCCAAAAGATCCCAATGGAATGAAGATGTTGACCATCTCAAATTCACATACAACGGAGACCATCTGGTTCTTCCTGAGGGCCCTCTCTCCTCTTGGAAGTCTCCAGAAAAAGATGTGAAAGTGGAGAGAGTAGCAGCCAGGAACAGTGTGATAGTGACCCTTGAAGATGTTGCTGAGATATTGGTGAATGTGGTGCCAGTGACCAAAGAAGATGATGCAGTTCACAACTACCAAGTGCCTGAGGATGATTGCTTTGCTCACTTTGAAATTCAATTCAGGTTCTTTGGGTTGTCTCCTAAGGTGGATGGTGTGCTTGGGAGGACTTACAGGGAAGATTTTGAGAACCCTGCAAAGGTTGGTGTGGCAATGCCTGTTGTTGGAGGAGAGGACAAATACAGGACTACCTCCTTGCTTTCTCCAAACTGTGCTTCTTGTGTCTTCTCTCCATTTACTTCCCATCACACTCAACCCACTCAAGTCACTCCAGAGTCCATGGCCACCCTTGATTGCTCCAAGTTTTCCTATGGCTTGGGAATCGTTTGCAAGAAATGA 1017 0.4543 MEITKIIIAVLLFVSCLSVQANAYYYRQCSTKGTRCYGKYIRCPNECPSSESTDPKAKVCHIDCDKPICRAVCRSRKPNCNAPGSGCYDPRFIGGDGRVFYFHGKSNEHFSLVSDSSLQINARFIGHRPAGRARDYTWIQALGILFNSKSLSLEAPKRSQWNEDVDHLKFTYNGDHLVLPEGPLSSWKSPEKDVKVERVAARNSVIVTLEDVAEILVNVVPVTKEDDAVHNYQVPEDDCFAHFEIQFRFFGLSPKVDGVLGRTYREDFENPAKVGVAMPVVGGEDKYRTTSLLSPNCASCVFSPFTSHHTQPTQVTPESMATLDCSKFSYGLGIVCKK* 339
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra2g1318 338 ProSiteProfiles Prokaryotic membrane lipoprotein lipid attachment site profile. 1 16 - -
Vra2g1318 338 Pfam Root cap 246 302 IPR009646 -
Vra2g1318 338 PANTHER ROOT CAP DOMAIN-CONTAINING PROTEIN 6 338 - -
Vra2g1318 338 PANTHER CONSTITUENT OF CELL WALL, PUTATIVE-RELATED 6 338 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra2g1318 Vra-Chr2 20995440 20996920 Proximal
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra2g1318 - - gmx:100803458 520.776
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vra2g1318 2 20995440 20996920 Vra2g1318 2 20995440 20996920 ECH