Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra2g1217 ATGTCCTCCAAAGGAAAAGACATAGCAGAAGGATCATCAAGATCTTCTTCTTCTTCTTCTTCTGCTACTTCTGCTGTTGTTTCTGATCGTCATCAGCAACATCAGCAAGAGCAGCTACCGTATCAGCAACAACAACAGCAACCACAACAACAACATCCTCTGAGTAGGTATGAATCTCAGAAGAGGAGGGATTGGAACACTTTTGGGCAGTACTTGAGGAATCAAAGGCCTCCTGTGGCACTTTCACAGTGCAATTCCAACCAAGTGCTGGATTTTCTAAGGTACTTGGATCAATTTGGGAAGACTAAAGTGCATGGTCAAGGGTGTCTCTTCTTTGGTCAAGTTGAGCCACCTGGTCCTTGCACTTGCCCTCTAAAACAAGCTTGGGGGAGCCTTGATGCTCTCATTGGAAGGCTAAGAGCTGCATATGAAGAAAATGGAGGCTTGCCTGAGACTAATCCATTTGCCAGTGGTGCCATAAGAGTTTATCTCCGTGAGATTCGAGACTCTCAAGCTAAGGCAAGAGGGATCCCTTATAAGAAGAAAAAGAAGAAGAGGAATCTCATCAAGCCCAACGGGGACACCTCAAACTTACCTTTGCAGCAGTAA 609 0.4532 MSSKGKDIAEGSSRSSSSSSSATSAVVSDRHQQHQQEQLPYQQQQQQPQQQHPLSRYESQKRRDWNTFGQYLRNQRPPVALSQCNSNQVLDFLRYLDQFGKTKVHGQGCLFFGQVEPPGPCTCPLKQAWGSLDALIGRLRAAYEENGGLPETNPFASGAIRVYLREIRDSQAKARGIPYKKKKKKRNLIKPNGDTSNLPLQQ* 203
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra2g1217 202 Pfam ALOG domain 47 169 IPR006936 -
Vra2g1217 202 PANTHER PROTEIN LIGHT-DEPENDENT SHORT HYPOCOTYLS 10-LIKE 2 201 - -
Vra2g1217 202 ProSiteProfiles ALOG domain profile. 56 183 IPR006936 -
Vra2g1217 202 MobiDBLite consensus disorder prediction 175 202 - -
Vra2g1217 202 PANTHER PROTEIN G1-LIKE2 2 201 IPR040222 -
Vra2g1217 202 MobiDBLite consensus disorder prediction 1 60 - -
Vra2g1217 202 MobiDBLite consensus disorder prediction 1 55 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra2g1217 Vra-Chr2 17006335 17008858 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra2g1217 - - gmx:100527554 303.138
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vra2g1217 2 17006335 17008858 Vra2g1217 2 17006335 17008858 ECH