Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra2g1201 ATGCTAGGGTTCACTCTTCCGCTTCAGCTTCGATGCTGCCAACACCTTTCCCAGCAACCGCCCCTTCCCAGCCCGATTTCGCCCAAGCCATTCTACCCGCCCGTCGTTCCTTCTGTCCCTCGGCCCCGAATCGGCCCCGGTCTGCGCGCCAGTTTCCCAGTCTTGTCCGGTTCGGTTTTCCCGGAGGATGAGCCGGACGTGGAGCTGGGGCGGCTGCTCTCTCTGCTACCGGAGGAGATGCGGCGTCGCGTGAGTGACCACGCGGAGCTGCCGCAGCTGATTGAGGTTGTGATGGATTTGGGCCGGAAACCGCTCGCGAGGTTTCCCTCCGGGGATTTCGTGATATCGGAGTATCCTATCACGGTTCAGGATATCGAACACGCCACTGCTCAGGTTGGTGACTTTGCTGTTGATAATCGAGCAGGAATCAGCAGAACACTGCATCGAATTAGTGCTATCAGAAATCGCAAGGGCACAATTATTGGTCTAACTTGTCGAGCTGGCAGGGCAATTTCAGGGAGTGCTATGTTGTTGCAAGATTTGATTAAGGATGGGGCTTCTTTGTTGTTGATTGGACCTCCAGGAGTAGGCAAAACTACAATTATTCGGGAAATTGCTAGGATGCTGGCAAATGATTACAAGAAACGGGTGATGATTGTGGACACCTCCAATGAAATCGGGGGTGATGGTGATATACCTCATGCTGGAATAGGCAATGCTCGACGAATGCAAGTTCCCAACTCTGATGCGCAACATAAGGTATTGATTGAAGCAGTCGAAAATCACATGCCACAAGTTATTGTAATTGATGAGATTGGTACAAAACTTGAAGCAATGGCTGCAAGCACAATTGCACAACGTGGGATTCAGCTTGTTGCCACTGCTCATGGAATCACAATTGAGAATCTTATAATGAATCCTTCCTTAGAGATGCTTGTTGGAGGGATACAGAGCGTGACACTCGGAGATGAAGAGGCCAGTCGCAGGGGTGTTCAGAAGACTGTATTGGAGAGGAAAGGGCCATCTACGTTTAGTTGTGGAGTGGAGATTATTTCGAAGACAGAATTGCGTATTCATCGTAGCCTTGAAGCAACTGTAGATGCTATTCTTTCTGGTCGTTTTCCAAATGTAGAAATACGGAAAATGAAGTCTCAAGAGCAGGAAGAGATTTTAGACGATGGACCTATAAGTGACAGTTCTCTTCAAAAAAATGGTGAAATTATGTTTGAAGAAGTTACGAAGGGAGCTGATGATCAAACCAGCCAAAATGAATCACTTTTCAAGTTGCCTGTTGACTTGGTAGAAGATTCCTGGGAGCATAAATCGCCACTTAGCCTGTTTTGTTATGGGATTTTAGACGCAACTGTTATTCAAGGGATTAAGCAGTTGAAAATCAATGATGCGGCCATTCAATTGACTGATAATATTAGTGAAGCAAATGCTTTACTTGCCTTGCAATCAAAGCTTAAAAAGAATCCAGGGATCCAGGCTGCTGCTAAATCTCATGATATTCCCATTTATGTAACAAAGACCAGTTCTTTGGAGCATGTAACAAAAGCTTTACGGGCATTATTAAGTGATTATGAAGATGGTATAAAGGATTTTGAAGTAACAGACAAGATAAAATCATTAGAGATGATTGATGCTTTGGAGGAGGCACGAATGGCTATAGAGCATACAGTTATTCTGAAAGGAGAACCTGCGGATCTACTACCAAGATCATCCCACATAATATCTCAGCAGCTGGAATTTATTCGTAAATACCAACTAGAAATAAGAAGAATCAGTGGAGAGTCAGGCATACATCTAAGGATACTTCCATCCCATTATGAAACTGATGATGTAAAAAGTAGTGAAACTTTTGAGTTTGATAGTGAATTAAATGAACTTGCCTCCAATGGCCAAGTGAATGGCTCATTGGGCACTCTGGATAGATTGCCCCTGCTACCCGAGTAG 1956 0.4504 MLGFTLPLQLRCCQHLSQQPPLPSPISPKPFYPPVVPSVPRPRIGPGLRASFPVLSGSVFPEDEPDVELGRLLSLLPEEMRRRVSDHAELPQLIEVVMDLGRKPLARFPSGDFVISEYPITVQDIEHATAQVGDFAVDNRAGISRTLHRISAIRNRKGTIIGLTCRAGRAISGSAMLLQDLIKDGASLLLIGPPGVGKTTIIREIARMLANDYKKRVMIVDTSNEIGGDGDIPHAGIGNARRMQVPNSDAQHKVLIEAVENHMPQVIVIDEIGTKLEAMAASTIAQRGIQLVATAHGITIENLIMNPSLEMLVGGIQSVTLGDEEASRRGVQKTVLERKGPSTFSCGVEIISKTELRIHRSLEATVDAILSGRFPNVEIRKMKSQEQEEILDDGPISDSSLQKNGEIMFEEVTKGADDQTSQNESLFKLPVDLVEDSWEHKSPLSLFCYGILDATVIQGIKQLKINDAAIQLTDNISEANALLALQSKLKKNPGIQAAAKSHDIPIYVTKTSSLEHVTKALRALLSDYEDGIKDFEVTDKIKSLEMIDALEEARMAIEHTVILKGEPADLLPRSSHIISQQLEFIRKYQLEIRRISGESGIHLRILPSHYETDDVKSSETFEFDSELNELASNGQVNGSLGTLDRLPLLPE* 652
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra2g1201 651 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 65 327 IPR027417 -
Vra2g1201 651 PRINTS Endopeptidase La (Lon) serine protease (S16) signature 192 211 - -
Vra2g1201 651 PRINTS Endopeptidase La (Lon) serine protease (S16) signature 596 614 - -
Vra2g1201 651 CDD AAA 185 274 - -
Vra2g1201 651 PANTHER P-LOOP CONTAINING NUCLEOSIDE TRIPHOSPHATE HYDROLASES SUPERFAMILY PROTEIN 63 611 - -
Vra2g1201 651 Pfam Sporulation stage III, protein AA 183 314 IPR045735 -
Vra2g1201 651 SMART AAA_5 184 315 IPR003593 -
Vra2g1201 651 PANTHER KINASE-RELATED 63 611 - -
Vra2g1201 651 Gene3D - 168 327 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra2g1201 Vra-Chr2 16458371 16477274 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra2g1201 - - gmx:100807394 1107.82
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vra2g1201 2 16458371 16477274 Vra2g1201 2 16458371 16477274 ECH