Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra2g1199 ATGGGCGATCTATCTCAACTTCTCGAAGCAGCTTCTGATTTTAGTCACTACCCAGGGGCGCAAAGCGATGATTCCGCTAGGGACTTTCTCAATCGCTTCCCTCTTACAGTCATTATCAATGCACTACAGACTAACTTTGACGTGCCTGACATAGAAAATACTCTTGTCGCATGCGTTGAAAAACTATTCAATACGACGTTGGGAGCTTCTTTGATCCTGCAGTATATGCCTTTTCTTCAAGTTGGTCTGCAGGCAGAATCTCAAGCAGTCAGATCCTTATCTTGCAAAACGGTAAGTCGCCTTCTAGAGAATGTTGACAATGATGACAAAGTTGCTGCTAGTGCTCGTCTAATTAAAGACTTCAACATATATCCTCTTTTGCTTGATTGCATCATAAAAGGTGATGAACAAGTTGCAGCTGTAGCAGCAGATGCAATTACAAAGTTAGCCAGTTTTCCTAAAGGCATGGAAATTATCTTTCCATCTGGCAAATTAGGTGAGATAGATCTGGAGCTTATAGCATCACAATGTTCATCACTGGGTCGAGTTCGTGTACTGGCACTGGTGGTGAAGCTTTTTTCTGTATCTAGATCGGCAGCATCCACTGTCTATAGCTTAAATCTACTTAAATTGTTGGAAGATGAACTCAGAAATGCTGACGATACCCTTGTAACTTTAAGTGTATTGGAACTTCTATATGAGTTGGCATTGATCGAACATAGTACAGAATTTTTGTCAAAGACTAGCCTCTTTGAATTGCTTTCGTCAATGATTAGCAACAATTCTGTGGAATCAATTTTAAGATCAAGAGCAATTATGATATGTGGAAGGCTTGTGCCCAAGGACATTATACACTCCTTCACGGACGAACCTTGTGTTAAAGCTGTTATTGCATCTATTGACGGTAGACTTCAGTCATTGAACCCTTCAGATATAGATGAATGTGAAACTGCACTTGAATCATTGGGTCATATAGGATCATCTACCCAGGGGGCCACATTATTACTCTCAGGTTCATCACCTGCTGCAAGACATGTTATAGATGCTGCTTTTGAACGACAAGGGCCACAAGGACATGGAAAACAGCTGGCTGCATTACATGCTCTCGGAAACATCTCCGGAGAAACCAGATCTAAGAATAGTATTATACTCAATGCTGAAGCAGAAGAAAATCTGCGACGCTTAATTTATGAAACAGCCACTAGAAGTTCAAAGCTGACTCCATCGGGTCTGTTTCGGTCAGTACTGCAGCAGGATGCAGAAATACGTCTAGCGGTCTATAGAGTGATAAGTGGATTGGTTGTCCGATCATGGTGCTTGATGGAGATATGCTCAAAAGATGATATTATAAACAAAGTGATTAATCCAACTATTGAAACCACGAAAATAGGTATGGAAGCCCGTTATAACTGCTGCAAGGCTATATTCCAAACACTGACACTTTCTGATAGTGTTTCTGCTTTTACAGATATATATGCAAAGTTGGAGAAAGCTGTTAAAATGGGTCCATACCTTGTTAAGAGCCATGCTGAACCTCAACCTGTTGTGGAGACTGCTGAAAGATTTTAA 1569 0.4079 MGDLSQLLEAASDFSHYPGAQSDDSARDFLNRFPLTVIINALQTNFDVPDIENTLVACVEKLFNTTLGASLILQYMPFLQVGLQAESQAVRSLSCKTVSRLLENVDNDDKVAASARLIKDFNIYPLLLDCIIKGDEQVAAVAADAITKLASFPKGMEIIFPSGKLGEIDLELIASQCSSLGRVRVLALVVKLFSVSRSAASTVYSLNLLKLLEDELRNADDTLVTLSVLELLYELALIEHSTEFLSKTSLFELLSSMISNNSVESILRSRAIMICGRLVPKDIIHSFTDEPCVKAVIASIDGRLQSLNPSDIDECETALESLGHIGSSTQGATLLLSGSSPAARHVIDAAFERQGPQGHGKQLAALHALGNISGETRSKNSIILNAEAEENLRRLIYETATRSSKLTPSGLFRSVLQQDAEIRLAVYRVISGLVVRSWCLMEICSKDDIINKVINPTIETTKIGMEARYNCCKAIFQTLTLSDSVSAFTDIYAKLEKAVKMGPYLVKSHAEPQPVVETAERF* 523
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra2g1199 522 PANTHER 26S PROTEASOME NON-ATPASE REGULATORY SUBUNIT 5-RELATED 3 522 IPR019538 GO:0043248
Vra2g1199 522 Gene3D - 35 484 IPR011989 -
Vra2g1199 522 Pfam Proteasome non-ATPase 26S subunit 57 510 IPR019538 GO:0043248
Vra2g1199 522 SUPERFAMILY ARM repeat 37 478 IPR016024 -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra2g1199 K06692 - gmx:100785671 784.252
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vra2g1199 2 16268809 16311291 Vra2g1199 2 16268809 16311291 ECH