Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra2g1192 ATGCAGCCTTACCAGAACCCTCCCTCACTGGATTCCGACCCGCAGCTGCCCCAAATCAAAATCCACCATCCCTCTTCCCCCCGCCACCCCTCCCCTGCGGCCGCTACCCCCACGCCCACTGCTGGCGCGCGCCGCAAAATCGGCGTGGCCGTGGACCTCTCCGACGAGAGCGCCTACGCGGTGCGCTGGGCCGTGCAGCACTACATCCGCCCCGGTGACGCCGTGATCCTGCTCCACGTCAGCCCTACGAACGTCCTCTTTGGCGCCGACTGGGGCTCTATCGACCTCTCCATAAACACCGACCCCAATTCCGACGAGGAGGCGGTCAACGCCGTCAACAACAACGACCACACCACCAAGCGCAAGCTCGAGGACGACTTCGATGCGTTCACGGCGTCAAAGGCCGCGGATCTCGCCAAACCGTTAAGGGAAGTGCAGATTCCGTACAAGATCCACATCGTGAAGGACCACGACATGAAGGAGAGACTGTGTTTGGAGGTGGAGAGGCTCGGGCTGAGCGCTGTCATCATGGGGAGTCGCGGGTTTGGTGCTGTGAGACGCGGGAGCGATGGGAGGCTCGGGAGTGTGAGTGATTACTGTGTGCATCACTGTGTTTGTCCTGTGGTTGTTGTGCGTTATCCTGATGATGTTGCTGCGACGGCTGAGGCGGTTGTGGCGGTGAAGGAGGCGGATGAGGGCGAGGCGGTGATCCAGCCCCACAAGAAAGAGGATTAG 735 0.615 MQPYQNPPSLDSDPQLPQIKIHHPSSPRHPSPAAATPTPTAGARRKIGVAVDLSDESAYAVRWAVQHYIRPGDAVILLHVSPTNVLFGADWGSIDLSINTDPNSDEEAVNAVNNNDHTTKRKLEDDFDAFTASKAADLAKPLREVQIPYKIHIVKDHDMKERLCLEVERLGLSAVIMGSRGFGAVRRGSDGRLGSVSDYCVHHCVCPVVVVRYPDDVAATAEAVVAVKEADEGEAVIQPHKKED* 245
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra2g1192 244 Pfam Universal stress protein family 44 212 IPR006016 -
Vra2g1192 244 MobiDBLite consensus disorder prediction 1 42 - -
Vra2g1192 244 SUPERFAMILY Adenine nucleotide alpha hydrolases-like 45 215 - -
Vra2g1192 244 PANTHER OS01G0783500 PROTEIN 4 234 IPR044162 -
Vra2g1192 244 PRINTS Universal stress protein signature 44 62 IPR006015 -
Vra2g1192 244 PRINTS Universal stress protein signature 190 212 IPR006015 -
Vra2g1192 244 CDD USP_Like 46 199 - -
Vra2g1192 244 Gene3D HUPs 36 224 IPR014729 -
Vra2g1192 244 PANTHER UNIVERSAL STRESS PROTEIN PHOS32 4 234 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra2g1192 Vra-Chr2 16073306 16074629 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra2g1192 - - pvu:PHAVU_011G149900g 404.06