Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra2g1191 ATGAGGGGTCCTTTAGGTGCAGTCATAGGTAGGTTCCCATCAAGTGACGGAGTTACCCAAATGGGTGGAATCATAAGACACAACAGGAAATGCAGGGACGTAACTGTTCTTGTGATCTTCATAGCTTTTTCAGTAGCAATGGTTGTCAACTCCAGCTTTGCTTTCAACCAAGGAAACCCACTAAGGCTTACTTATGGACTGGACTACAAAGGGAATTTGTGCGGGGACAAACATGCCCACCCTGGCCTCAGTGAATTGGAGCTCAGATATTGGCAAAATCCTAATCAGGTTTATGAGAGTGGACTGAAGGATAGCAAATTCAAACTGGGGGATGCCCGCAGTATATGCTTGTCTGAGTGCCCTATACCTTCCGAAGATTCCCTTAGTTGGGTGTGTGATTATCCAGAAGGAGATATTCGTCTTTCCATGACGGATTGGGCTAATAGGAACTATGATTATTTCGAGTTCCTTACACCCGAAATGAGAAATTCCTCCCTTCAACTTCAGGGTCCATGTTATCCTGTCATATTCCCTAGTGTAAATGTTTACTGGAGTTGCCAATTTATTGCTCGAGCATCAAACACGTCTTTGAAGCATTGGCAACAGATGGGCGGTGTTAAAATCAATGAAGACATTGTTATTGATAAATCTATTCACAAGTCTATTAATTCTCGATCTGCTGTTTTAAAGAGGTACATGGCAGACATAGGAAAGGCATGGCCTGTGCTGATTGTTTGTGGAGGGATTTTGCCTCTTTTTCTGTCTGTGATTTGGCTGATGATGATTCGACATTTTGTTGCTGCAATGCCTTGGATAACAGTTGTTCTGTTTAATGTTCTAATAATATCTGTCACAATGTTCTACTACCTAAAAGCTGGATGGATTGGAAATGATGCTATTTCTCCCATCATTGGTGAACATGACCCTTACATTAGTGTATATGGGAGGGAGCTGACTCATATAAGGGCTGTCACTATACTTATGACCTTTATCATGGTTGTTGCCTTTCTTACATCAATTGCTATTGTTCGACGCATCCTTATGGCAACATCTGTCCTCAAGGTTGCTGCAAAAGTAATAGGAGAAGTTCAAGCACTTATTATATTCCCACTCATACCATACAGTATACTTGTTGTGTTTTACATGTTCTGGATATCAGCTTCTCTTCATATACTCAGCTCTGGCCAGGTTGTTCAGAATAATTGCAACTCTAACTGCTGCACATATGATCTTATTGCAAAACGGGTAAACTGTGATCATTGTTGTGGTTATAGCATTCAATACACACCACATATTGGAGTTTCCATCCTTTTCCATCTATTTGGATGTTATTGGGCTACACAATTTTTCATAGCTTTCTCCTCGACAGTGATTGCTGGGTCTGTTGCCTCTTATTACTGGGCCCATGGTGAAACATCTCCAGAAATTCCTTTTCTTTCTGTGTTATCCTCCATGACGCGGCTTATGCAATATAATCTTGGGTCTGTGGCTCTTGGCTCTTTGATTGTATCATTTGTAGAATCTATACGCTTTCTGCTTGAAGCTATTCGCCGCAAGCTAAAAGACTCAAGTGATGGGCACAACAGTTGCATAGGCAAGGCTGCATACCGATCTTCACAATGTTTTCTCAAGTGTATTGAATGGACCATCAAATCAGTAAATCGAAATGCTTACATCCTGATTGCTATAACAGGCAAAAGTTTCTTTACTGCTTCTTCTATTGCGGCAGACCTGATAATGAATAATATTCTGAAGATTGGTCGTCTTAATGTGATCGGAGATGTCATTTTGTTCCTTGGAAAACTGTGTGTCAGCCTCTCATGTGCTTTGTTTGCGTTCCTCATGTTAGACACTCACAAATACAGATCTGCTCATAACAAGACCTCGTCTCCACTCTTTCCTGTTGTGGTTTGCTGGGCTCTTGGATACATTGTTGCAACCCTTTTCTTTGCAGTTGTGGAGATGTCAATCGATACCATAGTACTCTCATTCTGCCAGGATTCTGAAGAGCACCAAGGGACAGCCCAGTATGCGCCTCCCCTTCTCATTGAGACTCTCACTGACCAGAATGAAATGCAGAGACTCACCCAAGGACCCTAA 2100 0.4181 MRGPLGAVIGRFPSSDGVTQMGGIIRHNRKCRDVTVLVIFIAFSVAMVVNSSFAFNQGNPLRLTYGLDYKGNLCGDKHAHPGLSELELRYWQNPNQVYESGLKDSKFKLGDARSICLSECPIPSEDSLSWVCDYPEGDIRLSMTDWANRNYDYFEFLTPEMRNSSLQLQGPCYPVIFPSVNVYWSCQFIARASNTSLKHWQQMGGVKINEDIVIDKSIHKSINSRSAVLKRYMADIGKAWPVLIVCGGILPLFLSVIWLMMIRHFVAAMPWITVVLFNVLIISVTMFYYLKAGWIGNDAISPIIGEHDPYISVYGRELTHIRAVTILMTFIMVVAFLTSIAIVRRILMATSVLKVAAKVIGEVQALIIFPLIPYSILVVFYMFWISASLHILSSGQVVQNNCNSNCCTYDLIAKRVNCDHCCGYSIQYTPHIGVSILFHLFGCYWATQFFIAFSSTVIAGSVASYYWAHGETSPEIPFLSVLSSMTRLMQYNLGSVALGSLIVSFVESIRFLLEAIRRKLKDSSDGHNSCIGKAAYRSSQCFLKCIEWTIKSVNRNAYILIAITGKSFFTASSIAADLIMNNILKIGRLNVIGDVILFLGKLCVSLSCALFAFLMLDTHKYRSAHNKTSSPLFPVVVCWALGYIVATLFFAVVEMSIDTIVLSFCQDSEEHQGTAQYAPPLLIETLTDQNEMQRLTQGP* 700
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra2g1191 699 Pfam Plasma-membrane choline transporter 326 669 IPR007603 GO:0022857|GO:0055085
Vra2g1191 699 PANTHER PLASMA-MEMBRANE CHOLINE TRANSPORTER FAMILY PROTEIN 3 697 - -
Vra2g1191 699 PANTHER CHOLINE TRANSPORTER-LIKE (SLC FAMILY 44) 3 697 IPR007603 GO:0022857|GO:0055085
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra2g1191 K15377 - gmx:100815939 1319.29
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vra2g1191 2 16043667 16057605 Vra2g1191 2 16043667 16057605 ECH