Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra2g1176 ATGGCGGATAAGGAACTGCACATTGTTGTGTTTCCATGGCTAGCCTTTGGACACAATGTTCCATTTTTGGAGCTTGCAAAGCTCATAGCTCAAAAGGGTCACAAAATTTCTTTCATTTCCACACCTAAAAACATCCATTGCCTCCCTAAACTACCTGAAAATCTGAAACCTTGGTTGCATCTGATAGAATTCCCACTCCCCCGCGTTGAAGAACTCCCTGAAAATGCAGAGAACACGCTGGACACTCCTCCGCACTTGGTTCCATACCTCTTCAAGGCTTACGATGGTCTTGAAGAACCTTTGACTAAATTTCTGGAGAAGAGCAGCCCGGATTGGGTCATTTGCGACTTTGCACCACACTGGTTGCCCCCACTGTCTTCCAAGCTAGGTATCCCATGCATATTTTTTTCTAGTTTTTCTGCATCTGCTTCGTCTTTTGGTTTGGAGTGGTTTACGGGAAAGAAGAGTGTGGGATTTGCTGAAGCCAATCGTTTTCGTGATGTGTATACGAGGAAGCAAGTGGGTCAGAGTTCTCAGCCTAAGGAAGTGAATCGGTTCTTTGAAACCCTGAAAGGTGCTCAAGTTTTCGCTACAAGAAGCTGCATGGAGATTGAAGGTGAATTTGTCAAATCGCTTGAAAGTTCATCTGGGAAGTTGGTAATTCCAATTGGGTTGCTGCCAGCTTCGCCAGAAGACAGCAATGACCACAACTGGTACACCATGCTTAATTGGTTAGATAAATGGGAAAAGGGGTCAGTGATCTATGTTTCATTTGGAACTGAAGTCACGCTGAGTGATAAAGACTTCACTGAAATTGCTGTGGGATTAGAATTGTCTGGTTTTCCTTTTTTTTGGGCTGTGAAGAATCGAAACATCTCAGGTGGTAATGTTGAGTCACAGGATTGGATTGAGAATGAGTCAAAAAGGGGAATGATGTGGAGAACATGGGCACCTCAGTCCAGGATTTTAGCACACAAATCTGTTGGAGCATTCCTCACTCACTGTGGTTGGAACTCAGTGATAGAGGGTCTCCAAGTTGGGTGCCCACTTGTAATGTTGCCCTTCCAATATGATCAATGGTCGATTGCTAAGTTTATGGAGGAGAAGAAGGTAGGGGTTAAAGTACACAGAAATGAGCATGATTCCAGCTTCACTAGGGATTCATTGGCCAAGGCACTGACATCAGTGATGTCGGAAGAGGAAGGGAAATATCTTAGAAAAGCAGCACAAGAGATGAGTAAAATAGTTGGGGACAAACAACTGCAACTAAAATATGTTAATGAGTTTGTTGATTACATGAAAAACAATAGGCCTGCCTATAATTAG 1326 0.4344 MADKELHIVVFPWLAFGHNVPFLELAKLIAQKGHKISFISTPKNIHCLPKLPENLKPWLHLIEFPLPRVEELPENAENTLDTPPHLVPYLFKAYDGLEEPLTKFLEKSSPDWVICDFAPHWLPPLSSKLGIPCIFFSSFSASASSFGLEWFTGKKSVGFAEANRFRDVYTRKQVGQSSQPKEVNRFFETLKGAQVFATRSCMEIEGEFVKSLESSSGKLVIPIGLLPASPEDSNDHNWYTMLNWLDKWEKGSVIYVSFGTEVTLSDKDFTEIAVGLELSGFPFFWAVKNRNISGGNVESQDWIENESKRGMMWRTWAPQSRILAHKSVGAFLTHCGWNSVIEGLQVGCPLVMLPFQYDQWSIAKFMEEKKVGVKVHRNEHDSSFTRDSLAKALTSVMSEEEGKYLRKAAQEMSKIVGDKQLQLKYVNEFVDYMKNNRPAYN* 442
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra2g1176 441 SUPERFAMILY UDP-Glycosyltransferase/glycogen phosphorylase 6 439 - -
Vra2g1176 441 Gene3D Glycogen Phosphorylase B; 242 418 - -
Vra2g1176 441 ProSitePatterns UDP-glycosyltransferases signature. 316 359 IPR035595 -
Vra2g1176 441 Gene3D Glycogen Phosphorylase B; 1 241 - -
Vra2g1176 441 CDD GT1_Gtf-like 6 416 IPR002213 GO:0008194
Vra2g1176 441 PANTHER UDP-GLYCOSYLTRANSFERASE 91B1 3 439 - -
Vra2g1176 441 PANTHER EG:EG0003.4 PROTEIN-RELATED 3 439 - -
Vra2g1176 441 Pfam UDP-glucoronosyl and UDP-glucosyl transferase 252 418 IPR002213 GO:0008194
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra2g1176 Vra-Chr2 15622766 15624417 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vra2g1176 5 437 Glycosyltransferase AT2G22590 42.702 7.53e-120 356
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra2g1176 - - lja:Lj0g3v0150839.1 565.074