Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra2g1139 ATGTTGCTGCAGATATCACCCAGTTTGAGGCATGTCACTGTGCTTCCGGGAAAAGGGTTGAAGGAATTTATCAAAGTGAAGGTTGCATCAAGGAGGCTATCTTATCGGATGCTCTTCTATTCACTCTTGTTCTTCACATTCCTTCTTAGGTTTGTGTTTGTTCTGACAGCAGTGGATAACATTGATGGAGAAAACAAGTGTTCTTCCATAGGTTGCCTGGGAAAAAAATTGAGGCCAAAGATTTTGGGAAGAAGTCTTGAATCAAATGTCCCAGAAGTAATATACAAAATATTGGACCAACCCCTTGGAAAAAATGAATTAGAGCAAAGGACTGACATACCTCAGACTTTAGAAGAGTTCATGGTCCTAATAAAGGAAGGTGGATATGATGCCAAGACATTTGCAATTAAACTGAGAGAAATGGTGACCCTTATGGAACAAAGAACCAGAGAAGCCAAAATCCAAGAGTACTTATATCGTCATGTAGCATCAAGCAGCATACCAAAACAGCTTCACTGCCTTGGCTTGAAGCTGGCAAATGAGCACACCAACAATGCAGCTGCACGCCTTCAGCTACCCTCTGCAGAACTTGTCCCTGCTCTGGTTGACAACAACTACTTTCACTATGTTCTTGCCTCCGACAATGTGCTCGCTGCCTCTGTGGTTGCAAAATCACTTGTTCGAAACAGTTTGCGACCTCAGAAGGTTGTTCTGCACGTAATTACGGACAGAAAGACTTACTATCCCATGCAAGCTTGGTTCTCCTTGCACCCTTTATCACCTGCCATAATTGAGGTCAAGGCACTACACCACTTCGATTGGTTTACAAAGGGAAAGGTGCCTGTGCTGGAAGCAATGGAAAAAGATCAAAATGTGAGATCACAGTTTCGTGGAGGATCATCGGCTATTGTTGCAAATACTACTGAGAAGCCTAGAGCAATTGCAGCAAAGCTGCAAGCACTTAGTCCTAAGTATAATTCAGTAATGAATCACATTCGCATACATCTTCCAGAGCTGTTCTCAAGCCTTAGCAAGGTGGTCTTCCTTGACGATGACATTGTGGTACAAACTGATCTTTCACCTCTGTGGGACATTGACATGAATGGAAAAGTCAATGGAGCAGTAGAAACATGCAGTGGAGAAGATAAGTATGTTATGTCAAAGAGGTTGAAAAGCTATTTGAACTTCTCACACCCTTTAATATCCCAAAATTTTGATCCCAATGAATGTGCTTGGGCTTATGGCATGAACATTTTCGACCTTGATGCCTGGAGGAAGACCAATATAAGCTCTACATACCATTACTGGGTTGAGCAGAATATAAGATCAGACCTCAGTTTGTGGCAGCTAGGGACATTACCACCTGGATTAATAGCATTCCATGGTCATGTCCACACTATTGATCCTTTCTGGCACATGCTGGGATTGGGATATCAGGAAAGTACAAGCTTTGCTGATGCTAAGGGTGCTGGTGTCATCCATTTCAATGGCAGGGCAAAGCCATGGCTAGATATAGCTTTTCCCCATCTAAGGCCATTGTGGACTAAATACATTGACTTCTCAGATTACTTCATAAAGAGCTGCCATATCAAGGCATTGTAA 1602 0.4257 MLLQISPSLRHVTVLPGKGLKEFIKVKVASRRLSYRMLFYSLLFFTFLLRFVFVLTAVDNIDGENKCSSIGCLGKKLRPKILGRSLESNVPEVIYKILDQPLGKNELEQRTDIPQTLEEFMVLIKEGGYDAKTFAIKLREMVTLMEQRTREAKIQEYLYRHVASSSIPKQLHCLGLKLANEHTNNAAARLQLPSAELVPALVDNNYFHYVLASDNVLAASVVAKSLVRNSLRPQKVVLHVITDRKTYYPMQAWFSLHPLSPAIIEVKALHHFDWFTKGKVPVLEAMEKDQNVRSQFRGGSSAIVANTTEKPRAIAAKLQALSPKYNSVMNHIRIHLPELFSSLSKVVFLDDDIVVQTDLSPLWDIDMNGKVNGAVETCSGEDKYVMSKRLKSYLNFSHPLISQNFDPNECAWAYGMNIFDLDAWRKTNISSTYHYWVEQNIRSDLSLWQLGTLPPGLIAFHGHVHTIDPFWHMLGLGYQESTSFADAKGAGVIHFNGRAKPWLDIAFPHLRPLWTKYIDFSDYFIKSCHIKAL* 534
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra2g1139 533 PANTHER GALACTURONOSYLTRANSFERASE 4-RELATED 12 531 IPR029993 GO:0047262
Vra2g1139 533 CDD GT8_like_1 207 519 - -
Vra2g1139 533 Gene3D Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 203 524 IPR029044 -
Vra2g1139 533 PANTHER GALACTURONOSYLTRANSFERASE 12-RELATED 12 531 - -
Vra2g1139 533 SUPERFAMILY Nucleotide-diphospho-sugar transferases 208 530 IPR029044 -
Vra2g1139 533 Pfam Glycosyl transferase family 8 203 506 IPR002495 GO:0016757
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra2g1139 Vra-Chr2 14664797 14668196 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vra2g1139 1 532 Glycosyltransferase AT5G54690 79.588 0.0 877
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra2g1139 K20867 - gmx:100777811 998.038