Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra2g1124 ATGGCTTCCACAATCACCTCTTCCTCCTTATTCTCTGCCTCCATTCTCTCTCCACCCTCATCATCCCTCTTCTCCACCAAACCCACTCATGTCATCCCCACTCCCCGCTTCCACGCGCCTCGCGCGTCCATGTCCATCGCTTCCCCACCCCCTTACGACTTCTCTTCTTTTAGGTTCCAGCCAATCAAGGAATCCATTGTGTCACGTGAGATGACGCGCCGCTACATGACCGACATGGTCACGCATGCTGATACTGATGTTGTCATCATCGGTGCTGGGTCAGCCGGACTTTCCTGTGCCTACGAACTCAGCAAGAACCCTTCCGTTAATGTTGCCATCATCGAACAGTCCGTCAGTCCCGGTGGCGGCGCGTGGCTCGGTGGCCAGCTCTTCTCCGCCATGATAGTGCGTAAGCCAGCACATCTTTTCCTTGACGAGCTTGGTCTTGAGTATGACGAGCAAGAGAACTATGTGGTGATCAAGCATGCTGCACTGTTCACTTCGACCATCATGAGCAAGCTGTTGGCGAGGCCAAACGTGAAGCTGTTCAATGCAGTGGCAGCTGAAGATTTGATAGTGAAGAATGGAAGAGTTGGTGGGGTTGTCACTAACTGGGCCTTGGTTTCCATGAACCATGACACTCAATCGTGCATGGACCCCAATGTGATGGAGGCTAAAGTGGTGGTGAGTTCTTGTGGCCATGATGGACCCTTTGGAGCCACTGGTGTGAAGAGGCTCAAGAGCATTGGCTTGATTGATAATGTGCCAGGAATGAAGGCCCTTGACATGAACATGGCTGAGGATGCCATCGTCAGACTCACTAGAGAAATTGTTCCTGGCATGATCGTTACTGGAATGGAAGTTGCTGAGATTGATGGTGCTCCAAGAATGGGTCCAACCTTTGGAGCAATGATGATATCAGGGCAGAAAGCAGCGCATCTGGCTTTGAGATCTTTGAAACTTCCCAATGCTTTGGAATCTGTGGGAAATGTTCATCCTGAGCTTGTCCTAGCTGCTGCTGCTGCTGAATCTGTTGAAATTGCAGATGCTTAA 1053 0.51 MASTITSSSLFSASILSPPSSSLFSTKPTHVIPTPRFHAPRASMSIASPPPYDFSSFRFQPIKESIVSREMTRRYMTDMVTHADTDVVIIGAGSAGLSCAYELSKNPSVNVAIIEQSVSPGGGAWLGGQLFSAMIVRKPAHLFLDELGLEYDEQENYVVIKHAALFTSTIMSKLLARPNVKLFNAVAAEDLIVKNGRVGGVVTNWALVSMNHDTQSCMDPNVMEAKVVVSSCGHDGPFGATGVKRLKSIGLIDNVPGMKALDMNMAEDAIVRLTREIVPGMIVTGMEVAEIDGAPRMGPTFGAMMISGQKAAHLALRSLKLPNALESVGNVHPELVLAAAAAESVEIADA* 351
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra2g1124 350 TIGRFAM TIGR00292: thiazole biosynthesis enzyme 64 320 IPR002922 -
Vra2g1124 350 PANTHER THIAMINE THIAZOLE SYNTHASE 6 350 - -
Vra2g1124 350 Hamap Thiamine thiazole synthase, chloroplastic [THI4]. 2 328 IPR027495 GO:0009228
Vra2g1124 350 SUPERFAMILY FAD/NAD(P)-binding domain 47 312 IPR036188 -
Vra2g1124 350 Pfam Thi4 family 68 301 - -
Vra2g1124 350 PANTHER THIAMINE THIAZOLE SYNTHASE, CHLOROPLASTIC 6 350 - -
Vra2g1124 350 Gene3D - 53 83 - -
Vra2g1124 350 Gene3D - 84 319 IPR036188 -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra2g1124 K03146 - gmx:547462 575.474