Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra2g1123 ATGTGGAGAGATCCTGGAGCTCCCGCTGATTCGTTTTATGAAACTCGTCCTGAATGCACTGATGTTCCAAAGTCTAAATTTAGGATCAAGGCTGGCAAAACATTAAGTGCAAGAAAATGGCATGCCGCGTTTTCTCCAGAAGGGTATCTAGATATAGGCAAGACTCTAGGTCGAATCCACCGAGGGGGAATCCATCCATCAATTAGGGGAGAAGTTTGGGAGTTTCTACTTGGTTGCTATGATCCCAAGAGTACATTTCAGGAAAGAGATGAAATAAGACAACGTCGAAGGGATCTTTATAATACATGGAAAGAAGAATGTCGTATATTGTTTCCTCTTGTAGGAAGTGGTAGATTTATCACAGCACCTGCAGTTACTGAAGATGGTACACAATGTTTAGATCCATTGGTTTTGTTAGAAAATAATCCAGAGAATGGACCAGTTGTTCTTCAAGATGTTACTATTCCAACTTACTTAGAAAAGATCACAGACAAGAGAATAATTCAATGGATGTTAACACTTCATCAAATAGGTCTTGATGTTGTTCGCACTGATAGAACATTAGTATTTTATGAAAAGAAAGAAAACTTGTCAAAACTATGGGATATTCTCTCTGTTTATGCTAAAATAGATTCAGATGTTGGCTATGGTCAAGGAATGAGCGACCTGTGCTCTCCTATGATAATACTTCTTAATGATGAAGCCGATGCTTTTTGGTGCTTTGAACGTTTGATGCGTAGATTGCGAGGGAACTTTAGATGCACTGCTAACTCTGTTGGGGTGGAGGCACAATTAAGTAATTTGGCAACAATCACTCAAGTAATTGATCCAAAACTTCATCAACATATAGAACAAATTGGTGGAGGTGACTATCTATTTGCATTTCGGATGATAATGGTTTTATTTAGAAGAGAATTCTCCTTTTGTGACTCATTGTACCTTTGGGAGATGATGTGGGCACTAGAATATGATCCTGACTTGTTTTGGATGTATGAGGAGGCTGATGATAAATCTGAGGAATTTAAAGGACGAATGAAGTCATTACGTCACTATGGGAAGTATGAGAGAGAAAATATGAAAAATGGAGGAAAGAATGGAGAAGATCCTCCATTCCCCATATCTGTTTTCCTTGTTGCCAGTGTCTTGAAGGAAAAAAGTGCAATATTATTACAACAAGCAAAAGGTTTGGATGATGTTGTCAAGATATTGAATGATGTGAATGGAAACCTTGATGCCAAGAAAGCTTGTATGGCTGCACTAAAACTTCACAAGAAGTATTTGAAAAAGGCTAAGAATCCCTAA 1302 0.3802 MWRDPGAPADSFYETRPECTDVPKSKFRIKAGKTLSARKWHAAFSPEGYLDIGKTLGRIHRGGIHPSIRGEVWEFLLGCYDPKSTFQERDEIRQRRRDLYNTWKEECRILFPLVGSGRFITAPAVTEDGTQCLDPLVLLENNPENGPVVLQDVTIPTYLEKITDKRIIQWMLTLHQIGLDVVRTDRTLVFYEKKENLSKLWDILSVYAKIDSDVGYGQGMSDLCSPMIILLNDEADAFWCFERLMRRLRGNFRCTANSVGVEAQLSNLATITQVIDPKLHQHIEQIGGGDYLFAFRMIMVLFRREFSFCDSLYLWEMMWALEYDPDLFWMYEEADDKSEEFKGRMKSLRHYGKYERENMKNGGKNGEDPPFPISVFLVASVLKEKSAILLQQAKGLDDVVKILNDVNGNLDAKKACMAALKLHKKYLKKAKNP* 434
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra2g1123 433 PANTHER RAB-GTPASE-TBC DOMAIN-CONTAINING PROTEIN-RELATED 1 433 - -
Vra2g1123 433 Gene3D - 258 432 - -
Vra2g1123 433 PANTHER TBC1 DOMAIN FAMILY MEMBER GTPASE-ACTIVATING PROTEIN 1 433 - -
Vra2g1123 433 Gene3D putative rabgap domain of human tbc1 domain family member 14 like domains 156 252 - -
Vra2g1123 433 ProSiteProfiles TBC/rab GAP domain profile. 63 322 IPR000195 -
Vra2g1123 433 SUPERFAMILY Ypt/Rab-GAP domain of gyp1p 260 426 IPR035969 -
Vra2g1123 433 SUPERFAMILY Ypt/Rab-GAP domain of gyp1p 39 282 IPR035969 -
Vra2g1123 433 SMART tbc_4 60 345 IPR000195 -
Vra2g1123 433 Pfam Rab-GTPase-TBC domain 161 320 IPR000195 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra2g1123 Vra-Chr2 14255580 14264911 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra2g1123 - - gmx:100790955 770