Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra2g1121 ATGATTTCTGCAACTAAGCTCAAATCCGTTGATTTTTACAGAAAAATCCCGAGAGATTTGACTGAGGCGTCGTTATCGGGAGCGGGATTATCCATATTGGCAGCTCTCTTCATGATGTTTTTGTTTGGAATGGAACTAAGTAATTATTTGACTGTTAGCACCTCCACATCTGTGATTGTTGACAAGAGTTCTGATCATGACTATTTACGTATCGATTTCAATATCAGTTTTCCTGCACTCTCTTGTGAGTTTGCATCAGTTGATGTGAGTGATGTGCTGGGAACAAACAGGCTCAATATAACAAAAACAGTTCGGAAGTTTTCTATTGATTCAAATTTAAGACCCACTGGATCTGAGTTTCATTCAGGTACATTTGCAAATGCTGTAAAGCATGATGATGAAGTAGAAGGAGAATCTGTTGAAGGTTCATTAGCACTTACAACACATAATTTTGATAATTATGTTCATCAGTTCCCAATTACAGTTGTAAATTTTTACGCACCTTGGTGTTCCTGGTGTCAGCGTTTGAAACCTGCATGGGAGAAAACAGCTAAAATTATGAAAGAGAGGTATGACCCAGAAATTGATGGGCGCATTATTTTGGCAAAGGTGGATTGCACTCTAGAGGCAGATTTATGCAGGAGGAATCATATTCAAGGATATCCATCCATTCGAATCTTCCGTAGAGGAAGTGATGTCAGAAGTGAACATGGACATCATGAACACGAGTCCTATTATGGCGATCGTGATACAGAAAGCCTTGTCCAGTTTATGGAGAGTTTAGTTGCATCTCTCCCAACAGCATCTCAAAAGCCAGCTCTGGAAGATAAGTCTAATGCGGCAGAAAATGCAAAAAGGCCAGCACCATCAGCGGGTGGATGTAGAATTGAGGGATATGTGCGAGTGAAAAAGGTTCCAGGAAATTTGATCATCTCAGCTAGATCTGATTCCCATTCTTTTGATGCTTCTCAAATGAACATGTCACATGTCATAAACAACTTGTTTTTTGGAAAGAAAGTGACGCCCAGGGCTATGAGTGATGTGAAGCTCTTGATACCATACATAGGTAGCAGCCATGATAGGCTCAGTGGCCGGTCATTCTTTAATACTCGTGATTTCGGAGCAAATGTTACTATAGAACATTATATTCAGATAGTTAAAACAGAGGTTGTGAATAGAAAAGGTCACAGATTAATCGAGGAGTACGAGTACACAGCGCACAGCAGTGTGGCTCACAGTGTTGACATTCCTGTTGCGAAGTTTCATATTGAGCTCTCTCCAATGCAGGTCTTAATAACAGAAAACCAGAGGTCTTTTTCACATTTTATTACTAATGTCTGTGCCATTATTGGAGGTGTCTTCACGGTAGCTGGAATTTTGGACTCGATTCTGCACAACACTATCAGAATGATGAAAAAAGTTGAGCTTGGGAAAAATTTTTGA 1443 0.3992 MISATKLKSVDFYRKIPRDLTEASLSGAGLSILAALFMMFLFGMELSNYLTVSTSTSVIVDKSSDHDYLRIDFNISFPALSCEFASVDVSDVLGTNRLNITKTVRKFSIDSNLRPTGSEFHSGTFANAVKHDDEVEGESVEGSLALTTHNFDNYVHQFPITVVNFYAPWCSWCQRLKPAWEKTAKIMKERYDPEIDGRIILAKVDCTLEADLCRRNHIQGYPSIRIFRRGSDVRSEHGHHEHESYYGDRDTESLVQFMESLVASLPTASQKPALEDKSNAAENAKRPAPSAGGCRIEGYVRVKKVPGNLIISARSDSHSFDASQMNMSHVINNLFFGKKVTPRAMSDVKLLIPYIGSSHDRLSGRSFFNTRDFGANVTIEHYIQIVKTEVVNRKGHRLIEEYEYTAHSSVAHSVDIPVAKFHIELSPMQVLITENQRSFSHFITNVCAIIGGVFTVAGILDSILHNTIRMMKKVELGKNF* 481
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra2g1121 480 Pfam Thioredoxin 145 243 IPR013766 -
Vra2g1121 480 PANTHER ENDOPLASMIC RETICULUM-GOLGI INTERMEDIATE COMPARTMENT PROTEIN 1 480 IPR045888 -
Vra2g1121 480 MobiDBLite consensus disorder prediction 268 291 - -
Vra2g1121 480 Pfam Endoplasmic Reticulum-Golgi Intermediate Compartment (ERGIC) 7 97 IPR039542 -
Vra2g1121 480 CDD PDI_a_family 146 258 - -
Vra2g1121 480 Pfam Endoplasmic reticulum vesicle transporter 288 461 IPR012936 -
Vra2g1121 480 Gene3D Glutaredoxin 126 273 - -
Vra2g1121 480 ProSiteProfiles Thioredoxin domain profile. 120 263 IPR013766 -
Vra2g1121 480 PANTHER PROTEIN DISULFIDE-ISOMERASE 5-3 1 480 - -
Vra2g1121 480 SUPERFAMILY Thioredoxin-like 145 261 IPR036249 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra2g1121 Vra-Chr2 14216011 14233206 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra2g1121 - - gmx:100787595 879.396