Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra2g1096 ATGTCAGAGAACGACTTAGGTTGGGATTTTCACCTCCGGAAGCTCTCTGTCAGTGGCAGAGACTCCAACACCGCCAACGATCCCGCTTCTGATCCTTCCCTTCTTCCTTCCGTGAAAAAGCTTCATGCTTTATGCAAGACCGAAAATTCCGAGGACTTGGTGGCTAGGGTTTATACCTCCCTTAACAAGATTTTCCAGCGCGCTGCAGCTTCCCTCTCTCAATCTCGAACCTCCAATGGCCTTCTTTTGCTTGCAATTCTTCAGTTTTACCTAGACTTTGGGGAGATTGTTCTTCACGATGCTGATCCTAGTCTTAGGACATTTTTTCGGTCGTGCTTGAGCAGGGAGTTTGCTGATCCTGTTGTTGCTGAAGCAACACTTGAATTTCTCATCAACAACAAGAAGAAGCTTCTAACTTCCTTCCCTAACTTATTACCTCAGTTTTTTCCATTGTTATTAAAGTTGATTGCTTGGAATGGTGAAAGATTAGAGAAACTATTTTTGAAAGCCTTCCCAGCCTTGATATCACCTGGGTCATTTCTTCCCTTATTTCCATCTTTAGTAGACTTGCCAATTTTGGTAGTAGCATTGGAAAAGGTGGAAAAAAGCTCTGGACCCTTAATTGGGAGCAGCATAGCTTCTATTCAGAAGAATACTGCCCCTAAGATGCTACTTGCTCTTATGGATGAGGCATACACTGGTTCAACTATAGAAGATGGCGTAGGAGATTCTGAATATGAGGATAACAGTGCAATTGATGTTGCTGATCCATTGTTCCTTGAACTTTTGAAGGATGAAAATGATGGTATCGCTGAACGTCCCTGGTCATCTCCAGTGATGACTGCAATATTACAGACTTCAGTCAATAGTCCTTACTCTGATAAGCTGAAAGCAGTACTTAGCTTGACTCCCCGTCTTCTTGACGTGTACTTCTCCATAGCATTGCAAACTGTCAATAATTCTCTGATTTGTGCATTGATTCCTCTGCTCATGTCGAGATATGCTACAATATTTCCGGACAAAATATTTTCATATGAGGTCCGCAAGCGACTTTTGGAGTTTATGCTCTCTACATTTCAGTGTTCACCAAACTTCATTGCCCTTTTAAAGAAACCTATAATGGACAGACTTGGAGAAGCTTATGACAGCCCAGTCAAGACAGAATTAGCCTTGCAATTATGTTGGGCCATTGGGGAGCATGGTGGAGGTGGTGGGTCTCACAAAGATGAAGCCCGTGAGCTTTTTGAGAGTCTAGAACTGCTTCTGTATGAAAACCTTTCTTCAAGTCGTGTGGGCATGACACAGGAGGTATCCCTTGATAAGGATACTTACAGAAGGTCATCACAGTCCAGGCTTTTATGTTTTGTTGTGACAGCCATAGCAAAGCTTGCTACACATCATCGAGAGTTAATACCAAGAGCACGTGTATCCTTGGGCAAGGTAGCTCGGTCTCGAATTTCTGATGCTAGAGTATGGAGGCGTGCATGCGATTTCCTGGGTTTGATGAAAGACCCTGCTATATGTTCATCCATATTGGGGCCTTCGCGACCTACACAAGGTACAGCGCAGAAAGTTGGCAGCATAAACTGGAGTGAAGGTTCAAAGAAGATGATTGCACATATACCATTTTATATTCTAGGAGAACAAGAAGGGCCACCTTTTCATGATTTCTCATTTTCAGATATCATTCCCAGAAGATGA 1701 0.4303 MSENDLGWDFHLRKLSVSGRDSNTANDPASDPSLLPSVKKLHALCKTENSEDLVARVYTSLNKIFQRAAASLSQSRTSNGLLLLAILQFYLDFGEIVLHDADPSLRTFFRSCLSREFADPVVAEATLEFLINNKKKLLTSFPNLLPQFFPLLLKLIAWNGERLEKLFLKAFPALISPGSFLPLFPSLVDLPILVVALEKVEKSSGPLIGSSIASIQKNTAPKMLLALMDEAYTGSTIEDGVGDSEYEDNSAIDVADPLFLELLKDENDGIAERPWSSPVMTAILQTSVNSPYSDKLKAVLSLTPRLLDVYFSIALQTVNNSLICALIPLLMSRYATIFPDKIFSYEVRKRLLEFMLSTFQCSPNFIALLKKPIMDRLGEAYDSPVKTELALQLCWAIGEHGGGGGSHKDEARELFESLELLLYENLSSSRVGMTQEVSLDKDTYRRSSQSRLLCFVVTAIAKLATHHRELIPRARVSLGKVARSRISDARVWRRACDFLGLMKDPAICSSILGPSRPTQGTAQKVGSINWSEGSKKMIAHIPFYILGEQEGPPFHDFSFSDIIPRR* 567
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra2g1096 566 SUPERFAMILY ARM repeat 36 428 IPR016024 -
Vra2g1096 566 Pfam AP-5 complex subunit, vesicle trafficking 30 154 IPR028222 GO:0044599
Vra2g1096 566 PANTHER AP-5 COMPLEX SUBUNIT ZETA-1 1 566 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra2g1096 K19025 - gmx:100796067 980.704