Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra2g1093 ATGGTACCATCATCATCATCATCATCACTTCCTATTTTCTCACATGATACCAAACCCAACTTAAACTTCCCTCGGCACACCGCAACTTTTCATCCTTCCATTTGGGGGAATTATTTCCTTTCCTCTGATTCTATTTATGAAGATGATAGCGACATCAAACAAGTTACACTATTAAAAGAATATGTGAGGACGATGATTGTCTCTCCTGTTGATAACAATTTCCTCTTTAAATTAAACATCATCAACTCAGTCCAACATTTAGGTGTTTCTTATCATTTTGAACATGAAATTGATGAAACATTGCATCAAATTTATGAAATTTCAACAAAGGAGAACAACATAATAAGTTACAATGATGATCTTCATCATCTTGCTTTACTCTTCCGGTTGCTTAGACAACAAGGATATCCTATTTCATCGGATGTATTTTGCAAATTCAAGGATCAAGCAGGAAAGTTTAAGGAAAGCATTGTGAATGATGTAGACGGAATGTTGAGGTTGTATGAAGCATCCCAATTAAGATTCCATGGAGAAGAGATACTGGAAGAGGCATATAGTTTCACTCTTATTGAGTTAACTAAGTCATTAACTACCAAATTAAGCCCCTTTCTTTCTGGGTTAGTGCATCATAGCATAGGACAAGAACTTCGCAAGGGAATGCCTAGGTTGGAGGCAAGATATTATATATCTTTCTACCAACAAGATCCTTCACATAATGAATGTCTGTTAACCTTTGCAAAACTAGATTTTAATATGTTGCAGAAGCTCCATCGAAAAGAAGTCAGCAGCATGACCAAGTGGTGGGTTAAAGATTTGAATGTCTCGACCAATTTTCCCTTTGTACGAGATAGGATTGTGGAAGTTTGCTTTTGGATTGTTGGAGTCTATTATGAGCCGCAATACTGCCTTGCTCGAAGTATACTGAATAAAGTGGTTGCCATGACATCCATAATTGATGATGTGTATGATGCCTATGGAACCATTGATGAACTAGAGATTTTCACCAATGCAATAGAAAGGTGGGATATCTCCTCATTGGTTGATCTCCCAGAATATATGAAATTATGTTATAAGGCACTTTTGGATATTTTTGAAGAAACAGAGCAGGAGTTGAGAATGCAAGGAAAAGAATACTTCGTCAAGTATTCTAAAAATGAAATGAAAAGATTAATCCAAGCATACCTTACTGAGTCAAGATGGTTTAATTCAAACCACACACCAACAGTAGAAGAGTATATGGAAGTTGCAACTGTGACAAGCACTTATGCTATGTTGACAACTGTATCTTTCTTGGGCATGGAAGACACAACAGAGGAGGTCCTCATATGGGCAACGAGTCACCCAAAAATTATTGAAGCTGCTTCAGTTATTGCTAGGATCATGGATGACATTGTTGGAAGTGAGTTTGAGCATGAAAGAGGGCACGTTGTCTCAAGCGTAGATTGCTATATGATGCAATATAATAGTTCAAGGGAAAATGCGATTAAAGAACTGCATAAGTTGGTGGAGAGTGCTTGGAAGGACATTAATGAAGAATGCCTTAATCCTACTCAAATACCAATGAAGTTTCTCATGCGTGTTCTTAACCTTGCACGAATGATGGACGTACTTTACAAAGAACATGATAATTATACAAATTCGGAAGGAGTAATGAAGGATTATATCAATGCTGTACTAGTTAATAAGGTGCCCACACAAATAAGCTAA 1707 0.3685 MVPSSSSSSLPIFSHDTKPNLNFPRHTATFHPSIWGNYFLSSDSIYEDDSDIKQVTLLKEYVRTMIVSPVDNNFLFKLNIINSVQHLGVSYHFEHEIDETLHQIYEISTKENNIISYNDDLHHLALLFRLLRQQGYPISSDVFCKFKDQAGKFKESIVNDVDGMLRLYEASQLRFHGEEILEEAYSFTLIELTKSLTTKLSPFLSGLVHHSIGQELRKGMPRLEARYYISFYQQDPSHNECLLTFAKLDFNMLQKLHRKEVSSMTKWWVKDLNVSTNFPFVRDRIVEVCFWIVGVYYEPQYCLARSILNKVVAMTSIIDDVYDAYGTIDELEIFTNAIERWDISSLVDLPEYMKLCYKALLDIFEETEQELRMQGKEYFVKYSKNEMKRLIQAYLTESRWFNSNHTPTVEEYMEVATVTSTYAMLTTVSFLGMEDTTEEVLIWATSHPKIIEAASVIARIMDDIVGSEFEHERGHVVSSVDCYMMQYNSSRENAIKELHKLVESAWKDINEECLNPTQIPMKFLMRVLNLARMMDVLYKEHDNYTNSEGVMKDYINAVLVNKVPTQIS* 569
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra2g1093 568 SUPERFAMILY Terpenoid cyclases/Protein prenyltransferases 31 238 IPR008930 -
Vra2g1093 568 PANTHER TERPENE SYNTHASE 2-RELATED 10 545 - -
Vra2g1093 568 SFLD Isoprenoid Synthase Type I 238 563 - -
Vra2g1093 568 PANTHER OS04G0344100 PROTEIN-RELATED 10 545 - -
Vra2g1093 568 Gene3D Farnesyl Diphosphate Synthase 32 553 IPR008949 -
Vra2g1093 568 Gene3D - 72 238 IPR036965 GO:0010333|GO:0016829
Vra2g1093 568 Pfam Terpene synthase family, metal binding domain 243 508 IPR005630 GO:0000287|GO:0010333|GO:0016829
Vra2g1093 568 CDD Terpene_cyclase_plant_C1 25 561 IPR044814 GO:0010333|GO:0016102
Vra2g1093 568 SFLD Terpene Cyclase Like 1 C Terminal Domain 238 563 IPR034741 -
Vra2g1093 568 SUPERFAMILY Terpenoid synthases 238 564 IPR008949 -
Vra2g1093 568 Pfam Terpene synthase, N-terminal domain 34 210 IPR001906 GO:0010333|GO:0016829
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra2g1093 Vra-Chr2 12853531 12857665 Proximal
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra2g1093 K15803 - gmx:100801358 869.381