Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra2g1091 ATGTCTATGGTATCATCATCATCATCACTTCCTGTTTTCCCCCAGGATGCCAAACCCAACTCAAATTTCACTCGACAAATTGCAGCTTTTCATCCTTCCATTTGGGGGGACTATTTCCTTTCCTATGATTCTAGTTTTCATGAAGATGATAGCGACATCCAACAACTTACACTGTTAAAAGAATATGTGAGGAAGATGATTGTATGTCCTGTTGATAACAATTTCCTCTTTAAATTAAACATCATCAATTCAGTCCAACGATTGGGTGTTTCTTATCATTTTGAACACGAAATTGATGAAGCATTGCATCAAATTTATGAGATTTCAACAAAGGAGAACAATATAATAAGTTGCAATGATGAACTTCATCATCTCGCTTTACTCTTCCGGTTGCTTAGACAGCAAGGATATCCTATTTCGTCCGATGTATTTTTCCAATTCAAGGACAAAGCAGGAAAGTTTAAGGAGAGCATTGTGAATGATGTAGAAGGAATGTTGAGGTTGTATGAAGCATCCCAATTAAGATTCCATGGAGAAGAGATACTGGAAGAGGCATATAGTTTCACTCTTATTGAGTTAACTAAGTCATTAACTACCAAATTAAGCCCCTTTCTTTCTGGGTTAGTGCACCATAGTATAGGACAAGCACTTCGCAAGGGAATGCCTAGGTTGGAGGCAAGATATTATATATCTTTCTACCAGCAAGATCCTTCACATAATGAATGTTTATTAACCTTTGCAAAACTAGACTTTAATATGTTGCAGAATCTCCATCGAAAAGAAGTCTGCAGCGAGACCAAGTGGTGGCTTAAGGATTTGAATGTTCCCACTAATTTTCCTTTTGTACGAGATAGGATTGTAGAAGCTTGCTTTTGGATTGTTGGAGTTTATTATGAGCCGCAGTATTGTCTTGCTAGAAGAATACTGAGGAAAGTATTAGCCATATCATCCATCATTGATGATGTGTATGATGCCTATGGAACCATTGATGAACTAGAGATTTTTACAGATGCAATAGAAAGGTGGGATATCTCCTCATTAGTTGATCTCCCAGAATATATGAGATTATGTTACAAGGAACTTTTGGAAATTTTTGAAGAAACAGAGCAGGAGTTGAGAAAGCGGGGTAAAGAAAACTTCGTCAAGTATGCAGAAAAAGAAATGAAAAGACTAGTCCAGGCATATCTTATAGAGGCAAGGTGGTTTAATTTCAACCACACACCAACTGTAGAGCAGTACATGGAGATTGCAACTATGTCATGTGGTTATGCTATGCTGACAACTGTATCTTTTTTGGGCATGGAAGACGCAACAGAGGAGGTCCTCATATGGGCAACGAGCCACCCAAAAATTATTGAAGCTGCTTCAATTATTTGTAGGCTCATGGATGACATTGTTGGAAGTGAGTTTGAGCATGAAAGAGGACACGTTGTCTCAAGCGTAGATTGCTATATGAAGCAATATAATAGTTCAAGGCAAAATGCGATTAAAGAACTGCACAAGTTGGTGGAGAATGCTTGGAAGGACATTAATAAAGAATGTCTTAATCCTACTCAAGTATCAATGAAGTTTCTCGTGCGTGTTCTCAACCTTGCACGAATGATGGACGTACTATACAAAGAACAAGATAATTATACACATTCAGGAGGAATAATGAAGGATTATATCAAAGCTTTACTAGTTAATAAGGTGCCAATGCAAATAAGCTAA 1710 0.3749 MSMVSSSSSLPVFPQDAKPNSNFTRQIAAFHPSIWGDYFLSYDSSFHEDDSDIQQLTLLKEYVRKMIVCPVDNNFLFKLNIINSVQRLGVSYHFEHEIDEALHQIYEISTKENNIISCNDELHHLALLFRLLRQQGYPISSDVFFQFKDKAGKFKESIVNDVEGMLRLYEASQLRFHGEEILEEAYSFTLIELTKSLTTKLSPFLSGLVHHSIGQALRKGMPRLEARYYISFYQQDPSHNECLLTFAKLDFNMLQNLHRKEVCSETKWWLKDLNVPTNFPFVRDRIVEACFWIVGVYYEPQYCLARRILRKVLAISSIIDDVYDAYGTIDELEIFTDAIERWDISSLVDLPEYMRLCYKELLEIFEETEQELRKRGKENFVKYAEKEMKRLVQAYLIEARWFNFNHTPTVEQYMEIATMSCGYAMLTTVSFLGMEDATEEVLIWATSHPKIIEAASIICRLMDDIVGSEFEHERGHVVSSVDCYMKQYNSSRQNAIKELHKLVENAWKDINKECLNPTQVSMKFLVRVLNLARMMDVLYKEQDNYTHSGGIMKDYIKALLVNKVPMQIS* 570
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra2g1091 569 Gene3D Farnesyl Diphosphate Synthase 32 554 IPR008949 -
Vra2g1091 569 Gene3D - 73 239 IPR036965 GO:0010333|GO:0016829
Vra2g1091 569 PANTHER TERPENE SYNTHASE 2-RELATED 14 546 - -
Vra2g1091 569 SFLD Terpene Cyclase Like 1 C Terminal Domain 239 564 IPR034741 -
Vra2g1091 569 SUPERFAMILY Terpenoid synthases 239 565 IPR008949 -
Vra2g1091 569 CDD Terpene_cyclase_plant_C1 25 562 IPR044814 GO:0010333|GO:0016102
Vra2g1091 569 SFLD Isoprenoid Synthase Type I 239 564 - -
Vra2g1091 569 Pfam Terpene synthase family, metal binding domain 244 509 IPR005630 GO:0000287|GO:0010333|GO:0016829
Vra2g1091 569 SUPERFAMILY Terpenoid cyclases/Protein prenyltransferases 31 239 IPR008930 -
Vra2g1091 569 Coils Coil 485 505 - -
Vra2g1091 569 Pfam Terpene synthase, N-terminal domain 34 211 IPR001906 GO:0010333|GO:0016829
Vra2g1091 569 PANTHER OS04G0344100 PROTEIN-RELATED 14 546 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra2g1091 Vra-Chr2 12769247 12774270 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra2g1091 K15803 - gmx:100801358 876.7