Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra2g1051 ATGTCAACCTTCACTTACACAGTGAAGAACCTTATAGTCGTTTCATCACAACAGAGTTTTATACGGAACTCCTTGATCTCAAACATTGATTTCACATCTGTTCATATCTATCCTGATCTCTGGTTTCATGAGCAGGTATTTGAAGACTACATGAAATTTGTGTCAAAGTGGATGCTTTCTCACATTGAAGATGGTGATAAGGTACTGAACAAGCCGGTTGTGTTCTCTGAATTTGGATTGTCAGACATAAATTTTACAATGTCGGAGAGAAAAACAATGTACAAAACAATTTTAGACATATCGTACAAATCTGCTAAGAAAAACAGGTCTGGAGGTGGATGTATGGTTTGGCAATTCTTGGTTGGAGGAATGCAGGAGTTTAGTGATGATTTTGGAATCATTCCTTGGGAAAAGACATCAATTCCTTCACTGTTCATTGAACAATCATGCAGATTGGCGAAGGTGAAGGAGTGGCCGCATAAGGACAAAAGTTTCAAACAATTTAGAAAAAAGTGTGGAAATAAAATCCCTTGA 534 0.3727 MSTFTYTVKNLIVVSSQQSFIRNSLISNIDFTSVHIYPDLWFHEQVFEDYMKFVSKWMLSHIEDGDKVLNKPVVFSEFGLSDINFTMSERKTMYKTILDISYKSAKKNRSGGGCMVWQFLVGGMQEFSDDFGIIPWEKTSIPSLFIEQSCRLAKVKEWPHKDKSFKQFRKKCGNKIP* 178
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra2g1051 177 PANTHER - 17 167 IPR045053 GO:0004553
Vra2g1051 177 Gene3D Glycosidases 5 156 - -
Vra2g1051 177 PANTHER GLYCOSIDE HYDROLASE FAMILY 5 PROTEIN 17 167 - -
Vra2g1051 177 SUPERFAMILY (Trans)glycosidases 17 145 IPR017853 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra2g1051 Vra-Chr2 11474532 11475383 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vra2g1051 20 155 Glycoside Hydrolase AT2G20680 63.768 2.32e-60 191
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra2g1051 K19355 - vra:106780372 368.237
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vra2g1051 2 11474532 11475383 Vra2g1051 2 11474532 11475383 ECH