Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra2g1024 ATGATGGAGAAGATCCAGCACAGTGAAGTGGAAGTGAAGGGATTGAAGCTGCACGTGGCAGAGATTGGAACTGGGTCCAAGGCAGTGCTATTCTTACATGGATTCCCAGAGATCTGGTACACATGGAGGCACCAGATGATTGCTGTGGCAAACGCTGGTTATAGAGCTATTGCCTTTGATTTCAGAGGCTATGGACTCTCTCAGCAACCAGCTGAGCCAGAAAAGGAAACCATGTATGACCTAGTTCATGAAATTGTGGGTCTTTTGGATGCTTTAGGCATCACCAAGGCTTTTCTAGTTGGTAAGGACTTTGGTGCCATCCCAGGACATCTTACAACTGCAGTGCACCCAGAAAGAGTTGCTGGTATCATAAGTTTAGGCATTCCTTTCATGCTTCCAGGTCCCTCTGCAGTGGAGGGTCACCTTCTGCTCCCCAAAGGGTTTTATATTACTAGGTGGCGGGAGCCTGGGAGGGCAGAAGCAGATTTTGGCCGATTTCCTGTGAAATCTGTGATAAGAAACATCTACACTCTCTTTTCCAGAAGTGAGATTCCAATTGCTGCTGATGATCAAGAAATCATGGACTTGTTTGACCCATCTACTCCCCTACCTCCATGGTTATCTGAAGAAGATCTTGCAACCTATGCATCTTTATATGAAAAATCTGGATTCAGATATGCATTGCAGGTTCCTTATAGGAGTATCAATGTGGATGCTGGCTTAAGTGATGTAAAAGTGAGTGTTCCATCACTTCTGATTGTGGGTGAGAAAGATTATGTGTTCAAGTTTCCAGGCATGGAGGACTATATTCGAAGTGGGGCGGTGAAAAACTTTGTTCCTGACTTGGAAATCACATATATTCCAGAAGGAAGCCATTTTGTGCATGAACAAATCCCAGAGAAGGTGAACCAGCTCATCATTGAGTTCCTTGACAAACAAACTGTCTAA 948 0.4451 MMEKIQHSEVEVKGLKLHVAEIGTGSKAVLFLHGFPEIWYTWRHQMIAVANAGYRAIAFDFRGYGLSQQPAEPEKETMYDLVHEIVGLLDALGITKAFLVGKDFGAIPGHLTTAVHPERVAGIISLGIPFMLPGPSAVEGHLLLPKGFYITRWREPGRAEADFGRFPVKSVIRNIYTLFSRSEIPIAADDQEIMDLFDPSTPLPPWLSEEDLATYASLYEKSGFRYALQVPYRSINVDAGLSDVKVSVPSLLIVGEKDYVFKFPGMEDYIRSGAVKNFVPDLEITYIPEGSHFVHEQIPEKVNQLIIEFLDKQTV* 316
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra2g1024 315 Gene3D alpha/beta hydrolase 2 314 IPR029058 -
Vra2g1024 315 SUPERFAMILY alpha/beta-Hydrolases 2 312 IPR029058 -
Vra2g1024 315 PRINTS Epoxide hydrolase signature 33 51 IPR000639 GO:0003824
Vra2g1024 315 PRINTS Epoxide hydrolase signature 53 68 IPR000639 GO:0003824
Vra2g1024 315 PRINTS Epoxide hydrolase signature 113 126 IPR000639 GO:0003824
Vra2g1024 315 PRINTS Epoxide hydrolase signature 248 264 IPR000639 GO:0003824
Vra2g1024 315 PRINTS Epoxide hydrolase signature 287 309 IPR000639 GO:0003824
Vra2g1024 315 PANTHER EPOXIDE HYDROLASE 3 313 - -
Vra2g1024 315 PANTHER EPOXIDE HYDROLASE-LIKE PROTEIN 3 313 - -
Vra2g1024 315 Pfam alpha/beta hydrolase fold 28 263 IPR000073 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra2g1024 Vra-Chr2 10970819 10973264 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vra2g1024 2 312 Acyl Lipid Metabolism Gene Families AT4G02340 37.812 3.27e-68 214
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra2g1024 - - gmx:100802931 606.675
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vra2g1024 2 10970819 10973264 Vra2g1024 2 10970819 10973264 ECH