Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra2g1016 ATGAGATTGAGGAAGCGTAAACGATGTTTTCCCTCTTGTTCTTCTCTTCGCAAAGTTGACGAGGATGAGATTTATTGGAGACACAGAAAGGAAGATGAAGAGTTGGAATGGACACCTAATTCCACTCACTTAATATCTCAGTTGACTCAATGTTTTACTAATGCTATGGTTGGATCAAGATCATGGATAGGAGGACTCTTTCACCGCACAAGCACTAAGCGAAATAATGACAAATTTGTTGACTATCCTTTGAGTCCCATTGAGGAGGAAAGACTTCAAAGGCTTCAAGAACGGGTGCAAGTGGCTTATGATGAAACTCGCCCCGAACATCAAGAAGCACTGAGAGCATTATGGGTGTGTTCCTTTCCCAATGTATCTCTGGAAGGCCTAATTTCTGACCAATGGAAAGATATGGGATGGCAAGGTCCTAATCCATCAACTGACTTTAGGTTGTTACTGAAGAAAGAAGGAATCAGAGCAACCTGGGAGTACCCATTTGCTGTTGCTGGCATTAATATATCATATATGTTGATACAGATGTTGGATTTATACTCAGAAAAGCCACGATGTCTTCCAGGCGCGAATTTTCTCAAGTTATTAGGAGATAATGAAGAAGCGTTCGATATTTTATACTGCATAGCGTTTGAGATGATGGATGCACAATGGCTGGCTATGCACGCTTCCTACATGGATTTTAACGATGTTCTAAATGCAACACGAATTCAATTGGAGAGAGAGCTTTCCTTAGAAGACATCAACAGAATTCAAGATCTGCCTGCTTACAATCTGTTGTAA 795 0.4075 MRLRKRKRCFPSCSSLRKVDEDEIYWRHRKEDEELEWTPNSTHLISQLTQCFTNAMVGSRSWIGGLFHRTSTKRNNDKFVDYPLSPIEEERLQRLQERVQVAYDETRPEHQEALRALWVCSFPNVSLEGLISDQWKDMGWQGPNPSTDFRLLLKKEGIRATWEYPFAVAGINISYMLIQMLDLYSEKPRCLPGANFLKLLGDNEEAFDILYCIAFEMMDAQWLAMHASYMDFNDVLNATRIQLERELSLEDINRIQDLPAYNLL* 265
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra2g1016 264 Pfam ELMO/CED-12 family 162 236 IPR006816 -
Vra2g1016 264 Pfam ELMO/CED-12 family 94 150 IPR006816 -
Vra2g1016 264 PANTHER ENGULFMENT AND CELL MOTILITY 53 150 - -
Vra2g1016 264 PANTHER ENGULFMENT AND CELL MOTILITY 150 264 - -
Vra2g1016 264 PANTHER BNAC05G01970D PROTEIN 53 150 - -
Vra2g1016 264 PANTHER BNAC05G01970D PROTEIN 150 264 - -
Vra2g1016 264 ProSiteProfiles ELMO domain profile. 87 247 IPR006816 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra2g1016 Vra-Chr2 10854951 10859400 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra2g1016 K23538 - gmx:100811853 487.263