Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra2g0990 ATGGCATCAAACCAGGCAATGGCTTCTTCTTCCTTCATCAGCAACTTCATAATTCCCGACCACATTCTCGTACCGGGCTCTCTCGTTGGAAATAAGGGCCACGAGCCTGAGTGTCCCGTCCTCGTTTTTATCAACTCCAAGAGTGGCGGTCAACTCGGAGGAGATCTTCTCCAAACCTATCGCAATTTACTTAATCCAAAACAGGTTTTTGATTTGGGGGAGCAGGCGCCTGATGAGGTTCTCAGAACGGTGTATGCTAATTTGGAAAGCCTTAATCAACAGGGTGATCAGTTTGCTAAAACGATCATGAAGAAATTGAAGTTAATTGTTGCAGGGGGTGATGGAACAGCAGGCTGGCTTCTTGGAGTTGTTTGTGATCTCAAATTATCTCACCCTCCACCTATTGCCACTGTGCCACTGGGCACAGGGAATAATCTGCCTTTTGCATTTGGTTGGGGGAAGAAGAATCCAACAACAGATCAAGGATCAGTAGAGTCATTTTTAAATCAAGTCATGAAGGCAAAGGAAATAAAAATTGACAACTGGCACATTCTCATGAGAATGAGAGCTCCTAAAGTAGGTTCATGTGATCCAATTCCACCACTTGAGCTACCACATTCTTTGCATGCCTTCCATCGTGTATCTGAAGCAGATGAGCTTAATATGGAAGGTTGCCACACGTTTCGTGGGGGATTTTGGAATTACTTCAGCATGGGAATGGATGCTCAAGTGTCTTATGCATTTCATTCAGAACGAAAGAAGAATCCTGAAAAATTCAAAAACCAGTTGGTTAATCAGACTACTTATGCTAAGCTTGGATGCTCACAAGGATGGTTTCTTACTCCTCTTTTGCACCGTGCCGATAGGAACATAGCACAACTGACTAAAGTAAAATTCATGAAAAGGCATGGTGAATGGCAAGACCTACACATACCTCCTAGTATCAGGTCAATTGTATGTCTTAACTTGCCCAGCTTTTCTGGTGGACTAAATCCATGGGGTACACCTAACAGGAGAAAGCAGAGTGACAGAGATTTGACACCACCATTTGTTGATGATGGCCTACTAGAAATTGTTGGTTTTAGAAATGCGTGGCATGGCCTTGTTTTGTATGCTCCAAAAGGACACGGAACGCGTCTTGCTCAGGCACACAGAATCCGTTTTGAGTTTCGGAAAGGTGCTGCAGATCATACATTCATGAGGATTGATGGGGAGCCTTGGAAGCAACCCCTTCCAGCTGATGATGATACAGTTGTGGTTGAGATTTCTCACCTTGGCCAGGTTAGCATGCTATCCACTGGTGATTGCAAGTCTAAAAGTATGTATGATCCTTTATCACCACGCCAAGAGGTTGAGGAAGATGACAGTGATGAAGATGCCTCTCCATCAGAGGAATTTCGGAAGTTTGGTGCAGCAGATACATTTAAAATCCCATATGACATTGACCCTTCTCGTCTTAGTTAG 1464 0.4392 MASNQAMASSSFISNFIIPDHILVPGSLVGNKGHEPECPVLVFINSKSGGQLGGDLLQTYRNLLNPKQVFDLGEQAPDEVLRTVYANLESLNQQGDQFAKTIMKKLKLIVAGGDGTAGWLLGVVCDLKLSHPPPIATVPLGTGNNLPFAFGWGKKNPTTDQGSVESFLNQVMKAKEIKIDNWHILMRMRAPKVGSCDPIPPLELPHSLHAFHRVSEADELNMEGCHTFRGGFWNYFSMGMDAQVSYAFHSERKKNPEKFKNQLVNQTTYAKLGCSQGWFLTPLLHRADRNIAQLTKVKFMKRHGEWQDLHIPPSIRSIVCLNLPSFSGGLNPWGTPNRRKQSDRDLTPPFVDDGLLEIVGFRNAWHGLVLYAPKGHGTRLAQAHRIRFEFRKGAADHTFMRIDGEPWKQPLPADDDTVVVEISHLGQVSMLSTGDCKSKSMYDPLSPRQEVEEDDSDEDASPSEEFRKFGAADTFKIPYDIDPSRLS* 488
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra2g0990 487 MobiDBLite consensus disorder prediction 436 467 - -
Vra2g0990 487 SMART dagk_c4b_2 234 406 IPR000756 GO:0004143|GO:0007205
Vra2g0990 487 PIRSF DAG_kinase_plant 3 437 IPR016961 GO:0004143
Vra2g0990 487 ProSiteProfiles DAG-kinase catalytic (DAGKc) domain profile. 35 188 IPR001206 GO:0016301
Vra2g0990 487 PANTHER DIACYLGLYCEROL KINASE 9 487 - -
Vra2g0990 487 Gene3D - 231 414 - -
Vra2g0990 487 PANTHER DIACYLGLYCEROL KINASE 9 487 IPR037607 GO:0004143|GO:0007165
Vra2g0990 487 Pfam Diacylglycerol kinase accessory domain 232 406 IPR000756 GO:0004143|GO:0007205
Vra2g0990 487 Pfam Diacylglycerol kinase catalytic domain 39 164 IPR001206 GO:0016301
Vra2g0990 487 Gene3D - 38 185 IPR017438 -
Vra2g0990 487 SMART dagk_c4a_7 39 182 IPR001206 GO:0016301
Vra2g0990 487 SUPERFAMILY NAD kinase/diacylglycerol kinase-like 37 412 IPR016064 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra2g0990 Vra-Chr2 10376030 10384270 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vra2g0990 10 478 Acyl Lipid Metabolism Gene Families AT2G20900 73.585 0.0 727
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra2g0990 K00901 - gmx:100817198 845.499
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vra2g0990 2 10376030 10384270 Vra2g0990 2 10376030 10384270 ECH
Vra2g0990 2 10376030 10384270 Vra2g0990 2 10376030 10384270 PCT