Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra2g0969 ATGGCTGGAATTGGCTTTGAGGACCTGCTTCCTGTCATGGCCAACAAGCTTGGTGGGGAGGGGCTTATGAAGGAGCTCTGCAACGGGTTTGAGCTGCTGGTGGACAAAGAAAAAGGGGTGATAACGTTGGAGAGTTTGAGGGAGAAAGCTGCACTCTTGGGGCTGCAGGACTTGAAGGAGGATGAACTTGTGAGCATGATGACTGAAGGGGATCTTGATGGAGATGGGGCACTCACCCAGATGGAGTTTTGCGTTTTGATGTTCAGGTTGAGCCCTGAGTTGATGGAGGAATCCTGGTTTTGGCTTGAAGACGCTCTCCAACATGAACAACTCAACCAACATCACAACAACACCGATAGCAACTCTTCCATTTAA 375 0.496 MAGIGFEDLLPVMANKLGGEGLMKELCNGFELLVDKEKGVITLESLREKAALLGLQDLKEDELVSMMTEGDLDGDGALTQMEFCVLMFRLSPELMEESWFWLEDALQHEQLNQHHNNTDSNSSI* 125
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra2g0969 124 ProSitePatterns EF-hand calcium-binding domain. 71 83 IPR018247 -
Vra2g0969 124 Gene3D - 4 119 - -
Vra2g0969 124 Pfam EF-hand domain pair 37 89 IPR002048 GO:0005509
Vra2g0969 124 ProSiteProfiles EF-hand calcium-binding domain profile. 58 93 IPR002048 GO:0005509
Vra2g0969 124 PANTHER CALCIUM-BINDING EF-HAND PROTEIN 3 112 - -
Vra2g0969 124 SUPERFAMILY EF-hand 23 103 IPR011992 -
Vra2g0969 124 PANTHER CALCIUM-BINDING PROTEIN KIC 3 112 IPR044205 GO:0005509
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra2g0969 Vra-Chr2 9947845 9948623 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vra2g0969 6 109 EF-hand Containing Proteins AT5G54490 61.905 1.30e-41 132
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra2g0969 K24345 - gmx:100527206 219.164
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vra2g0969 2 9947845 9948623 Vra2g0969 2 9947845 9948623 ECH