Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra2g0950 ATGGCAGAACCTAAGGTTAAGTACGATCGCCAACTCAGAATATGGGGTGACCAAGGACAAGCAGCCCTCGAGAAATCTAGTATTTGCTTACTTAACTGTGGCCCAACGGGTTCTGAAACACTGAAGAATCTTGTTCTTGGTGGGATTGGAAGCATCACTGTAGTTGATGGATCTAAAGTCGAAGAGGGCGACCTTGGAAACAATTTTTTGGTGGACGAGTCAAGCCTTGGAAAGTCAAAGGCAAAATGTGTTTGCTCATTTCTTCAAGAGCTGAATGACGCAGTTAAAGCTAAGTTTGTAGAAGAGTCTCCTGAAACATTGATTGAGACAAATCCATCATTCTTTTCTCAATTTACTTTGGTCGTTGCCACTCAGCTCGTGGAATATTCAATGATTAAGCTTGACCGAATCTGCAGGGAGGCAAATGTGATTTTGATCTTTGCTCGCTCCTATGGCCTTACAGGGTTTGTTCGAATTAGTGTGAAGGAACATGATGTGATTGAGTCAAAGCCTGAACATTTCTTGGATGATCTACGTTTAAATAACCCTTGGCCTGAACTCAAGAGATTTGCTGATGACATTGATTTGAATGTTCAAGATCCTGTGGTCCATAAGCACATACCATATGTTGTCATTCTTGTCAAGATGGCTGACGAGTGGGCAAAAAGCCATGGTGGTAGGCTTCCATCGACTAGAGAAGAAAAGAAGGAGTTCAAGGAGCTTCTTAAGGCTGGGATGGTTGCACAAGATGAGGATAATTATAAAGAGGCTATTGATTCATCATTCAAAGTATTTGCTCCCCGAGGAATTAGTATGGAGTTGCAACAGATACTAAATGATAGTGCTGCTGAAGTAGATTCTAATTCGTCAGATTTTTGGGTATTGGTGGCAGCTCTGAAGGATTTCATTGCAAATGAAGGGGGCGGGGAGGCACCTCTTGAAGGATCTATACCGGATATGACTTCTTCCACTGAGCAATATGTGAATTTGCAGAATATCTATCACGCCAAAGCTGAGGCTGATTTTCTTGTAATAGAACGTGTAGCGAGAGGTATATTGAAGAAGATTGGTAGAGATTCAAATAGCATTCCAAGGTCAACGATTAAAAGCTTCTGTAAAAATGCAAGAAAACTCAAAGTTTGCAGGTACCGTCTAATTGAAGATGAGTTTAATGCTCCAAACTTACCTGATTTACAGAAGTACTTAACTGATGAGGATTCCAGCATTGCCATGGGAATTTATATTTTGCTTCGAGCGGCTGACCGGTTTTCTGCCAATTACAATAGTTTTCCCGGCCAATTTGACAGTGCCATGGACGAGGATATACCTCGATTAAAGAGCACAGCAATCGGCTTACTTAATGACTTGGGATGCAATGGGGCCACTTTGGCTGAGGACCTTATCAACGAGATGTGTCGCTTTGGTGCTGCAGAGCTTCATGCTGTTGCTGCTTTGGTTGGAGGAATTGCATCGCAAGAAGTGATCAAGCTCATAACAAAGCAATTCGTACCAATGTCCGGAACCTACATATTCAACGGCATTGACCACAAATCACAGCTGTTGTCACTATAA 1572 0.4218 MAEPKVKYDRQLRIWGDQGQAALEKSSICLLNCGPTGSETLKNLVLGGIGSITVVDGSKVEEGDLGNNFLVDESSLGKSKAKCVCSFLQELNDAVKAKFVEESPETLIETNPSFFSQFTLVVATQLVEYSMIKLDRICREANVILIFARSYGLTGFVRISVKEHDVIESKPEHFLDDLRLNNPWPELKRFADDIDLNVQDPVVHKHIPYVVILVKMADEWAKSHGGRLPSTREEKKEFKELLKAGMVAQDEDNYKEAIDSSFKVFAPRGISMELQQILNDSAAEVDSNSSDFWVLVAALKDFIANEGGGEAPLEGSIPDMTSSTEQYVNLQNIYHAKAEADFLVIERVARGILKKIGRDSNSIPRSTIKSFCKNARKLKVCRYRLIEDEFNAPNLPDLQKYLTDEDSSIAMGIYILLRAADRFSANYNSFPGQFDSAMDEDIPRLKSTAIGLLNDLGCNGATLAEDLINEMCRFGAAELHAVAALVGGIASQEVIKLITKQFVPMSGTYIFNGIDHKSQLLSL* 524
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra2g0950 523 PIRSF APP-BP1 1 523 IPR030667 GO:0019781|GO:0045116
Vra2g0950 523 Gene3D - 347 523 - -
Vra2g0950 523 PANTHER UBIQUITIN-ACTIVATING ENZYME E1 2 522 IPR045886 -
Vra2g0950 523 Gene3D - 2 269 - -
Vra2g0950 523 CDD APPBP1_RUB 7 521 - -
Vra2g0950 523 Pfam ThiF family 8 501 IPR000594 -
Vra2g0950 523 SUPERFAMILY Activating enzymes of the ubiquitin-like proteins 7 519 IPR035985 GO:0008641
Vra2g0950 523 PANTHER NEDD8-ACTIVATING ENZYME E1 REGULATORY SUBUNIT 2 522 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra2g0950 Vra-Chr2 9618203 9625679 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vra2g0950 7 78 EF-hand Containing Proteins AT2G30110 32.468 2.96e-06 48.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra2g0950 K04532 - gmx:100793799 978.778
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vra2g0950 2 9618203 9625679 Vra2g0950 2 9618203 9625679 ECH