Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra2g0942 ATGGGGTGCTCCATGAGAGTGTGTAGTGTCTTATTTTTGACAGTGTTGTTAGTGGCATGTGCAAGAGGGGAGGACCCTTATAGGTTTTACACTTGGAATGTCACGTATGGAGACATTTATCCTCTTGGTGTTAAACAACAGGGGATTTTGATAAACTGGCAATTTCCAGGGCCACAAATTGAGGCCGTGACCAATGATAACTTGATCATCAATGTTTTCAATAGCTTGGATGAACCTTTCCTCTTATCTTGGAATGGAGTGTTGCAGAGGAGAAACTCATGGCAGGATGGAGTGTATGGTACCAATTGTCCAATTCCACCAGGGCAGAACTTCACTTATGTTATTCAAGTGAAGGATCAAATTGGTAGCTACTTCTACTACCCTTCTCTTGCATTCCACAAGGCAGCAGGAGGTTATGGTGGATTCAAAATTGCGAGCCGCCCTGGGATTCCAGTGCCTTTCCCTCCTCCGGCAGGAGAGTTCACCATATTGGCCGGAGATTGGTACAAGAGAAATCATACAGATTTGAGGGCAATTTTAGATGGTGGAAGTGACCTTCCCTTCCCTGATGGACTTATCATCAATGGACGTGGTTCCAATGCCTACACATTCACAGTTGATCAAGGCAAGACATACAGATTCAGGATTTCAAATGTGGGTCTCACAACTTCAATCAATTTCAGAATCCAAGGTCATAAAATGACAATTGTTGAGGTGGAAGGGACCCACACTCTCCAGAACATTTATGATTCACTTGATGTTCATCTGGGCCAGTCTTATTCTGTGTTGGTTACAGCTGATCAGCCACCCCAAGACTACCTTATTGTTGTTACAACACGATTTACCTCTCAAGTGTTGAATGCTACCTCCATTTTTCGTTACAGTAACTCTGGAGGAAGTGTTACTGGCCTTTTTCCTTGGGGGCCAACTATTCAAGTTGATTGGTCTTTAAACCAAGCTCGCTCTCTTAGGAGGAATTTGACAGCAAGTGGGCCAAGGCCTAATCCACAAGGATCATACCATTATGGTTTGATAAATACAACTCGTACAGTTAGACTTCAAAATTCTGCTCCAGTTATCAATGGCAAACAGAGATATGCTGTGAATAGTGTGTCCTTCATACCTGCTGATACACCACTTAAACTGGCTGATTACTACAAGATCCAAGGTGTGTTCTCTCTTGGAAGTATCTCTGACAACCCCACTGGTGGTGGTGGTTACCTTCAAACTTCTGTCATGGAAGCCGATTTCCGTGGCTTTCTGGAAGTTGTCTTTGAGAATACTGAAGACACTGTGGAATCTTGGCACATTGACGGCCACAGCTTCTTTGTAGTTGGAATGGATGGAGGACAATGGTCACAAGCTAGCAGGCTTGGTTACAATTTAAGAGATACAATTTCTCGTTCCACAGTTCAGGTTTATCCCAAGTCATGGACTGCACTTTACGTGCCTTTGGACAATGTGGGAATGTGGAATGTGAGATCTGAGAATTGGGTTCATCAGTATTTGGGCCAGCAATTTTATCTGAGGGTTTATTCTCCTGCAAATTCATGGAGAGATGAGTACCCAATTCCAAGTAATGCTCTGAGGTGTGGCAAAGCTGTGGGTCACTATTAA 1617 0.436 MGCSMRVCSVLFLTVLLVACARGEDPYRFYTWNVTYGDIYPLGVKQQGILINWQFPGPQIEAVTNDNLIINVFNSLDEPFLLSWNGVLQRRNSWQDGVYGTNCPIPPGQNFTYVIQVKDQIGSYFYYPSLAFHKAAGGYGGFKIASRPGIPVPFPPPAGEFTILAGDWYKRNHTDLRAILDGGSDLPFPDGLIINGRGSNAYTFTVDQGKTYRFRISNVGLTTSINFRIQGHKMTIVEVEGTHTLQNIYDSLDVHLGQSYSVLVTADQPPQDYLIVVTTRFTSQVLNATSIFRYSNSGGSVTGLFPWGPTIQVDWSLNQARSLRRNLTASGPRPNPQGSYHYGLINTTRTVRLQNSAPVINGKQRYAVNSVSFIPADTPLKLADYYKIQGVFSLGSISDNPTGGGGYLQTSVMEADFRGFLEVVFENTEDTVESWHIDGHSFFVVGMDGGQWSQASRLGYNLRDTISRSTVQVYPKSWTALYVPLDNVGMWNVRSENWVHQYLGQQFYLRVYSPANSWRDEYPIPSNALRCGKAVGHY* 539
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra2g0942 538 Pfam Multicopper oxidase 160 296 IPR001117 -
Vra2g0942 538 Gene3D - 158 332 IPR008972 -
Vra2g0942 538 SUPERFAMILY Cupredoxins 344 534 IPR008972 -
Vra2g0942 538 CDD CuRO_3_AAO_like_1 375 497 IPR034275 GO:0005507
Vra2g0942 538 CDD CuRO_1_AAO_like_1 29 145 IPR034273 GO:0005507
Vra2g0942 538 PANTHER L-ASCORBATE OXIDASE HOMOLOG 9 534 - -
Vra2g0942 538 ProSiteProfiles Prokaryotic membrane lipoprotein lipid attachment site profile. 1 20 - -
Vra2g0942 538 Gene3D - 27 148 IPR008972 -
Vra2g0942 538 PANTHER MULTI-COPPER OXIDASE 9 534 IPR045087 -
Vra2g0942 538 SUPERFAMILY Cupredoxins 154 334 IPR008972 -
Vra2g0942 538 SUPERFAMILY Cupredoxins 24 174 IPR008972 -
Vra2g0942 538 Pfam Multicopper oxidase 34 147 IPR011707 GO:0005507
Vra2g0942 538 Gene3D - 343 536 IPR008972 -
Vra2g0942 538 Pfam Multicopper oxidase 378 512 IPR011706 GO:0005507|GO:0016491
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra2g0942 Vra-Chr2 9461001 9465569 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra2g0942 - - gmx:100797670 1065.06
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vra2g0942 2 9461001 9465569 Vra2g0942 2 9461001 9465569 ECH