Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra2g0914 ATGGCCAGTGTCATCTCAGCTGTAGGAAGAAGGCTTGAGGGGAAGGTGGCAATGGTCACCGGTGGTGCTAGCGGCATCGGTGAGGCCACTGCAAGACTCTTCTCTAAGCATGGAGCACACGTGGTGATAGCTGATATCCAAGACCATTTAGGTCTTTCTCTTAGCAAGGAGTTGGAATCCGCTTCCTATATCCATTGCGATGTCACAAACGAAAACGATGTTGAGAACGCTGTTAACTCGGTGGTTTCCAAACACGGCAAACTAGATACCATGTTCAACAACGCCGGCATAACCGGGGCGAACAAAACCAGCATATTGGACAACACGAAGTCGGAATTTGAGGCAGTGATCAACGTTAACCTAGTTGGTGTTTTTCTTGGAACAAAGCACGCTGCAAGGGTTATGATTCCTGCGCGGAGAGGAAGCATAATCAACACTGCCAGTGTCTGCGGAAGCATAGGTGGCGTGGCCTCACATGCGTACACAGGTTCGAAACACGGTGTGGTGGGGTTGACGAAAAACAGTGCGGTGGAGCTTGGAGCATTCGGTGTGAGGGTGAACTGCGTATCACCGTACGTGGTTGCCACACCCTTGGCTAAGAACTTTTTTAAGCTTGACGACAAGGGGGTTCTCGACGTGTATGCAAACCTAAAAGGTGCTACTCTTGAACCAAACGATGTGGCCGAAGCTGCTCTGTATTTAGCCAGCGATGAATCCAAGTATGTCAGTGGTCTCAATCTTGTGGTTGATGGAGCCTTCACTGTCCTCAACAGTGGCTTTTGTGTCTTTGGACAATCATCATGA 804 0.495 MASVISAVGRRLEGKVAMVTGGASGIGEATARLFSKHGAHVVIADIQDHLGLSLSKELESASYIHCDVTNENDVENAVNSVVSKHGKLDTMFNNAGITGANKTSILDNTKSEFEAVINVNLVGVFLGTKHAARVMIPARRGSIINTASVCGSIGGVASHAYTGSKHGVVGLTKNSAVELGAFGVRVNCVSPYVVATPLAKNFFKLDDKGVLDVYANLKGATLEPNDVAEAALYLASDESKYVSGLNLVVDGAFTVLNSGFCVFGQSS* 268
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra2g0914 267 PRINTS Short-chain dehydrogenase/reductase (SDR) superfamily signature 86 97 IPR002347 -
Vra2g0914 267 PRINTS Short-chain dehydrogenase/reductase (SDR) superfamily signature 141 149 IPR002347 -
Vra2g0914 267 PRINTS Short-chain dehydrogenase/reductase (SDR) superfamily signature 161 180 IPR002347 -
Vra2g0914 267 Gene3D - 4 263 - -
Vra2g0914 267 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 13 255 IPR036291 -
Vra2g0914 267 PANTHER MOMILACTONE A SYNTHASE 4 260 - -
Vra2g0914 267 PRINTS Glucose/ribitol dehydrogenase family signature 16 33 IPR002347 -
Vra2g0914 267 PRINTS Glucose/ribitol dehydrogenase family signature 86 97 IPR002347 -
Vra2g0914 267 PRINTS Glucose/ribitol dehydrogenase family signature 135 151 IPR002347 -
Vra2g0914 267 PRINTS Glucose/ribitol dehydrogenase family signature 161 180 IPR002347 -
Vra2g0914 267 PRINTS Glucose/ribitol dehydrogenase family signature 182 199 IPR002347 -
Vra2g0914 267 PRINTS Glucose/ribitol dehydrogenase family signature 217 237 IPR002347 -
Vra2g0914 267 PANTHER 3-OXOACYL-(ACYL-CARRIER-PROTEIN) REDUCTASE (AFU_ORTHOLOGUE AFUA_6G11210) 4 260 - -
Vra2g0914 267 CDD secoisolariciresinol-DH_like_SDR_c 11 254 IPR045309 GO:0016616
Vra2g0914 267 Pfam Enoyl-(Acyl carrier protein) reductase 21 253 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra2g0914 Vra-Chr2 9120669 9122143 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vra2g0914 12 255 Acyl Lipid Metabolism Gene Families AT1G63380 34.109 7.69e-30 112
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra2g0914 - - gmx:100782627 462.225