Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra2g0913 ATGGCAAGTGTCAACTCAGCTGCTGCCACTGTCAGAAGGCTTGAGGGGAAAGTGGCGATTATCACTGGTGGTGCCAGCGGCATAGGTGAGGCCACCGCAAGACTCTTCTCTAAGCACGGAGCTCATGTGGTGATAGCTGATATTCAAGACGATTTGGGTCTTTCTCTCTGCAATGAGTTAGAATCTGCTATATATGTTCACTGTGACGTTACAAAGGAAGAAGACGTTGAAAACTGCGTCAATGTAGCTGTTTCCAAGTACGAGAAACTGGACATCATGGTTAATAACGCTGGTCAATTGGATGAGTTCAAAAGAAGCATATTGGACAACACAAAGTCTGAGTTTGAGAGAGTGATAAGAGTGAACATGGTTGGTCCATTTCTAGGAACAAAGCACGCGGCAAGGGTGATGATTCCTGCAAAAAGGGGTTGCATAATTAACACAGCTAGTGTTGCAGGATGCATAGGTGGAGGTGCTACACATGCCTACACCAGTTCAAAACATGGGCTTGTGGGGCTGACGAAAAACACTGCGGTGGAGCTTGGACAATTCGGTATTCGGGTGAACAGTGTATCGCCTTATCTGGTTGCCACACCGATGTTGAATGAGTATTTCAATCTTGATGAAGAAGGAGTTGGTGAGGCTTATTCGAACCTAAAAGGTTCTTATCTTGTGACCAGGGATGTGGCCGAAGCTGTTGCTTATTTGGCTGAGTCTAAGTATGTTAGTGGTCACAATCTTGTGTTAGATGGAGGATTCTCCATTACAAATGCAGGATTTTCTCCTTGGCAGTCTCAGTAA 801 0.4532 MASVNSAAATVRRLEGKVAIITGGASGIGEATARLFSKHGAHVVIADIQDDLGLSLCNELESAIYVHCDVTKEEDVENCVNVAVSKYEKLDIMVNNAGQLDEFKRSILDNTKSEFERVIRVNMVGPFLGTKHAARVMIPAKRGCIINTASVAGCIGGGATHAYTSSKHGLVGLTKNTAVELGQFGIRVNSVSPYLVATPMLNEYFNLDEEGVGEAYSNLKGSYLVTRDVAEAVAYLAESKYVSGHNLVLDGGFSITNAGFSPWQSQ* 267
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra2g0913 266 PANTHER 3-OXOACYL-(ACYL-CARRIER-PROTEIN) REDUCTASE (AFU_ORTHOLOGUE AFUA_6G11210) 8 260 - -
Vra2g0913 266 PRINTS Short-chain dehydrogenase/reductase (SDR) superfamily signature 88 99 IPR002347 -
Vra2g0913 266 PRINTS Short-chain dehydrogenase/reductase (SDR) superfamily signature 143 151 IPR002347 -
Vra2g0913 266 PRINTS Short-chain dehydrogenase/reductase (SDR) superfamily signature 163 182 IPR002347 -
Vra2g0913 266 PANTHER MOMILACTONE A SYNTHASE 8 260 - -
Vra2g0913 266 ProSitePatterns Short-chain dehydrogenases/reductases family signature. 150 178 IPR020904 GO:0016491
Vra2g0913 266 PRINTS Glucose/ribitol dehydrogenase family signature 18 35 IPR002347 -
Vra2g0913 266 PRINTS Glucose/ribitol dehydrogenase family signature 88 99 IPR002347 -
Vra2g0913 266 PRINTS Glucose/ribitol dehydrogenase family signature 137 153 IPR002347 -
Vra2g0913 266 PRINTS Glucose/ribitol dehydrogenase family signature 163 182 IPR002347 -
Vra2g0913 266 PRINTS Glucose/ribitol dehydrogenase family signature 184 201 IPR002347 -
Vra2g0913 266 PRINTS Glucose/ribitol dehydrogenase family signature 219 239 IPR002347 -
Vra2g0913 266 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 15 255 IPR036291 -
Vra2g0913 266 Pfam Enoyl-(Acyl carrier protein) reductase 23 254 - -
Vra2g0913 266 Gene3D - 2 262 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra2g0913 Vra-Chr2 9113202 9114254 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vra2g0913 2 255 Acyl Lipid Metabolism Gene Families AT1G24360 31.559 7.20e-30 112
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra2g0913 - - gmx:100787995 411.379