Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra2g0912 ATGGCCAATGGTTCTGTGGTCTCAGCTGCTGTTAAAAGACTTGAGGGGAAAGTGGCGATTATAACTGGTGGTGCCAGCGGAATAGGTGAGGCCACTGCAAGACTCTTCTCTAAGCATGGAGCTCATGTGGTGATAGCTGATATTCAAGACGATTTGGGTCTTTCTCTCTGTAATGAGTTGGAATCAGCTCTATATGTTCATTGTGACGTTACAAAGGAAGAAGACGTTGAAAACTGTGTCAACGTAGCTGTTTCAAAGTACGGGAAGCTGGACATCATGTTTAATAACGCAGGTACAGGTGACGAGTTCAAAAGAAGCATACTGGATAACACAAAATCTGATTTTGAGAGAGTGATAAGTGTGAACTTGGTTGGTCCATTTCTGGGAACAAAGCACGCTGCAAGAGTGATGATTCCTGCTAAAAGGGGTTGCATAATTAACACAGCTAGTGTTGCAGGATGCATAGGTGGAGGTGCTACACATGCCTACACCAGTTCAAAGCATGCCCTAGTGGGACTAACGAAAAACACTGCCGTGGAGCTTGGACAATTCGGCATTCGGGTGAACTGCGTTTCCCCTTTTGCAATTGTGACACCGTTGTTGAACAAATATTTCAATCTTGATGAAGAAGGAGTTCGTAAGACTTACATGAACCTAAAAGGTTGGTATCCTGTGCCTAACGATGTGGCAGAAGCTGCTCTTTACTTAGCAGGTGATGAGTCTAAGTATGTTAGTTCTCATAATCTTGTGTTAGACGGAGGTTTGATCAATTCAAACGTAGGATTTCCTATGTTTGAGATGTAA 804 0.4328 MANGSVVSAAVKRLEGKVAIITGGASGIGEATARLFSKHGAHVVIADIQDDLGLSLCNELESALYVHCDVTKEEDVENCVNVAVSKYGKLDIMFNNAGTGDEFKRSILDNTKSDFERVISVNLVGPFLGTKHAARVMIPAKRGCIINTASVAGCIGGGATHAYTSSKHALVGLTKNTAVELGQFGIRVNCVSPFAIVTPLLNKYFNLDEEGVRKTYMNLKGWYPVPNDVAEAALYLAGDESKYVSSHNLVLDGGLINSNVGFPMFEM* 268
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra2g0912 267 Pfam Enoyl-(Acyl carrier protein) reductase 23 255 - -
Vra2g0912 267 PANTHER MOMILACTONE A SYNTHASE 6 261 - -
Vra2g0912 267 PRINTS Glucose/ribitol dehydrogenase family signature 18 35 IPR002347 -
Vra2g0912 267 PRINTS Glucose/ribitol dehydrogenase family signature 88 99 IPR002347 -
Vra2g0912 267 PRINTS Glucose/ribitol dehydrogenase family signature 137 153 IPR002347 -
Vra2g0912 267 PRINTS Glucose/ribitol dehydrogenase family signature 163 182 IPR002347 -
Vra2g0912 267 PRINTS Glucose/ribitol dehydrogenase family signature 184 201 IPR002347 -
Vra2g0912 267 PRINTS Glucose/ribitol dehydrogenase family signature 219 239 IPR002347 -
Vra2g0912 267 Gene3D - 4 264 - -
Vra2g0912 267 PRINTS Short-chain dehydrogenase/reductase (SDR) superfamily signature 88 99 IPR002347 -
Vra2g0912 267 PRINTS Short-chain dehydrogenase/reductase (SDR) superfamily signature 143 151 IPR002347 -
Vra2g0912 267 PRINTS Short-chain dehydrogenase/reductase (SDR) superfamily signature 163 182 IPR002347 -
Vra2g0912 267 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 15 255 IPR036291 -
Vra2g0912 267 ProSitePatterns Short-chain dehydrogenases/reductases family signature. 150 178 IPR020904 GO:0016491
Vra2g0912 267 CDD secoisolariciresinol-DH_like_SDR_c 13 255 IPR045309 GO:0016616
Vra2g0912 267 PANTHER 3-OXOACYL-(ACYL-CARRIER-PROTEIN) REDUCTASE (AFU_ORTHOLOGUE AFUA_6G11210) 6 261 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra2g0912 Vra-Chr2 9097877 9098938 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vra2g0912 14 265 Acyl Lipid Metabolism Gene Families AT1G63380 30.827 3.38e-28 107
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra2g0912 - - gmx:100794412 432.565