Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra2g0855 ATGATGATGATCAGATCAGTAATAACAAGTTGTTCCTTCTTTGTATCAACGATTTTGTTTCTTCTCTCCATTTCGGATTTGTTAGTGAAAATCCATGGCCTTGGTTTTGGAATCAACTACGGACAGATAGCCAACAATTTACCTCTTCCATCTCAAGTAGCTGTTCTTATAAAATCTTTGAATGTGAGTAGGATCAAACTGTATGATGCTGATCCAAATGTTTTGGTGGCCTTCTCAGAAACCAATGTGGAATTCGTTATAGGACTTGGGAATGAGTACCTAGAGAACATGACAAACCCTTCTAAAGCTCAAACTTGGATTCAGCAGCATGTCCAACCTTACTTCTCACAGACCAAAATCACTTGCATCACTGTGGGAAATGAGGTGTTCAATAGCAATGATACTCAGCTAATGTTGAACCTCCTTCCAGCAATGCAAACTGTGCATGATGCCCTTGTTAATCTTGGACTAGATCAGGAAGTTACTGTCACAACTGCTCATTCCTTCAACATATTATCCAATTCCTACCCTCCTTCATCTGGGGCTTTTAGGGAAGATCTTGCACAATATATCCAACCCCTTCTTGATTTTCATGCTCAAATCAACACACCTTTCCTAATCAATGCATACCCTTTCTTTACATACAAAGACAACCCAGATGTGGTTCCCTTAAACTATGTTCTTTTTCAGCCAAATCAAGGCACGGTTGATCCAAATACCAATTTGCACTATGACAACATGTTATATGCTCAAATTGATGCTGTCTATGCTGCCATCAAACAAATGGGGCATGATGACATTCAAGTGAGGATTTCTGAGACTGGTTGGCCTTCTAATGGTGACCCTGAAGAGGTTGGAGCTACTCCACAGAATGCAGAACTGTACAATAGTAACTTGCTCAAGAGGATAGAGCAGAAACAAGGCACTCCTGCAAAACCATCTGTTCCTATTGATATTTATGTTTTTGCACTTTTTAATGAGGATTTGAAACCCGGTCCAGCTTCAGAGAGAAACTATGGCCTTTACTATCCTAATGGTACTCCAGTTTACAACATTGGATTGAAGGGTTATCTTCCACAAATGCCTATGGCAGCTAAATCCAATATTTTGCCAGTCAATTTTTTTGTATGCATAGTTGTAAGCTTCATCTTTGCTTTGGAGCTTTCAAGATGGTGA 1176 0.3963 MMMIRSVITSCSFFVSTILFLLSISDLLVKIHGLGFGINYGQIANNLPLPSQVAVLIKSLNVSRIKLYDADPNVLVAFSETNVEFVIGLGNEYLENMTNPSKAQTWIQQHVQPYFSQTKITCITVGNEVFNSNDTQLMLNLLPAMQTVHDALVNLGLDQEVTVTTAHSFNILSNSYPPSSGAFREDLAQYIQPLLDFHAQINTPFLINAYPFFTYKDNPDVVPLNYVLFQPNQGTVDPNTNLHYDNMLYAQIDAVYAAIKQMGHDDIQVRISETGWPSNGDPEEVGATPQNAELYNSNLLKRIEQKQGTPAKPSVPIDIYVFALFNEDLKPGPASERNYGLYYPNGTPVYNIGLKGYLPQMPMAAKSNILPVNFFVCIVVSFIFALELSRW* 392
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra2g0855 391 PANTHER GLUCAN ENDO-1,3-BETA-GLUCOSIDASE BG1-RELATED-RELATED 13 367 IPR044965 GO:0004553|GO:0005975
Vra2g0855 391 Pfam Glycosyl hydrolases family 17 37 352 IPR000490 GO:0004553|GO:0005975
Vra2g0855 391 Gene3D Glycosidases 35 358 - -
Vra2g0855 391 SUPERFAMILY (Trans)glycosidases 36 352 IPR017853 -
Vra2g0855 391 PANTHER GLUCAN ENDO-1,3-BETA-GLUCOSIDASE 14 13 367 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra2g0855 Vra-Chr2 8026523 8030201 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vra2g0855 86 385 Glycoside Hydrolase AT2G27500 65.116 9.96e-153 432
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra2g0855 - - gmx:100818948 709.138
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vra2g0855 2 8026523 8030201 Vra2g0855 2 8026523 8030201 ECH