Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra2g0854 ATGGCAACCTTGTCAAGTGTGAAGGTTTCCTCCCACTGCATGTTTCAAATTCCAAGCAAAAATCAATTCACTTTTGGCACCACAGTGAAGTGTCCTTCTCTTGGGTCTGTAAAGAGTGTTTCGAGAACTTTTGGCTTGAAGTCATCCTCTTCATTTAGAGTGACTGCCATGGCTTCTTACAAGATTAAGCTGATCGGCCCAGATGGAAAAGAGAACGAATTTGAAGCCTCAGATGATACTTACATCCTAGATGCAGCAGAGGATGCTGGAGTTGAACTTCCTTACTCGTGCCGTGCGGGAGCTTGCTCTACCTGTGCTGGGAAGATTGTTTCTGGTTCAGTGGATCAGTCTGATGGCTCATTCCTTGATGACAACCAAATGAAGGAAGGCTTTCTACTTACCTGTGTCTCCTATCCAACTGCAGACTGTGTAATTGAAACTCACAAGGAAGGAGAGCTCTACTGA 465 0.4495 MATLSSVKVSSHCMFQIPSKNQFTFGTTVKCPSLGSVKSVSRTFGLKSSSSFRVTAMASYKIKLIGPDGKENEFEASDDTYILDAAEDAGVELPYSCRAGACSTCAGKIVSGSVDQSDGSFLDDNQMKEGFLLTCVSYPTADCVIETHKEGELY* 155
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra2g0854 154 CDD fer2 62 146 IPR001041 GO:0051536
Vra2g0854 154 PANTHER FERREDOXIN 5 154 - -
Vra2g0854 154 Pfam 2Fe-2S iron-sulfur cluster binding domain 67 140 IPR001041 GO:0051536
Vra2g0854 154 ProSitePatterns 2Fe-2S ferredoxin-type iron-sulfur binding region signature. 97 105 IPR006058 GO:0051537
Vra2g0854 154 ProSiteProfiles 2Fe-2S ferredoxin-type iron-sulfur binding domain profile. 60 151 IPR001041 GO:0051536
Vra2g0854 154 Gene3D - 57 154 IPR012675 -
Vra2g0854 154 SUPERFAMILY 2Fe-2S ferredoxin-like 55 153 IPR036010 GO:0051536
Vra2g0854 154 TIGRFAM fdx_plant: ferredoxin [2Fe-2S] 58 154 IPR010241 GO:0009055|GO:0022900|GO:0051537
Vra2g0854 154 PANTHER FERREDOXIN 5 154 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra2g0854 Vra-Chr2 8018445 8020956 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra2g0854 K02639 - gmx:100785611 273.092
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vra2g0854 2 8018445 8020956 Vra2g0854 2 8018445 8020956 ECH