Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra2g0852 ATGGCTGAAAAGCACCACCTCATTCTCCTTCTTCTCTGCGCCACTCTTCAATTCTCTTCATCTTCACCCTCCGATCACTTTTACAATGTTGGAGAACTTGTCCCATTTTTTATCAACAAAGTGGGACCCTTCAACAACCCCAGTGAGACCTATGAATACTATGATTTGCCATTCTGCGCCCCAGTCCCAATTGTCAAAAAGAGAGAGTCCCTGGGGGAAGTTCTCAATGGTGACCGTTTGAGCAATGCTTTGTATGAGTTCAAGTTCAGAGAGGACAAAATTGATGAGACCTTGTGCCCAAAGAAGCTTACAGTTGATGAAATTGGCTTCTTTAAGCGCGCTATAGACCGTGAATTTTACTTCCAATTTTACCTGGATGATCTTCCATTCTGGGGGTTCATTGGGAAACTAGAAGAAGATAGGTGGACTCCTGGTGGAGGAGGACAAAACTATTACCTTTTTACACATGTTCAGTTTGATGTTCTTTACCATGAGAATCAAGTCATACAAGTAAATGCATTTGGCGATCCAAATCGTGCGGTAGATATCACTAAAGATGTTGGTGTTGATGTTAAGTTCACTTATTCTGTTACCTGGAATGCCACTAAAATACGTTTTGAGAACAGGATGGATAGATACTCAAGGGCTTCGTTGATGTCTGTGCATCAGCAAGTTCATTGGTTCTCTTTCATCAACTCAATTGTCATCATTTTGCTTTTGACTGGTTTGCTTGCCCTGCTTTATATGCGACATCTGAGGAATGATTTGAAAAAGTACTCTGATGCAAATGAAGAAGATAGAGAGGTTGGTTGGAAGTGCCTTCATGGCGATGTATTCAGACCTCCTGCTAACTCATCCTTACTGTTTGCTGTTGTTGGAACTGGTACCCAATTGCTAATCTTGACTTGTGTATTGCTGTTTCTAGCACTTATTGGCACCCTTTATCCCTACAATCGTGGAGGACTGTTGAATTGGCTTGTCTTGCTGTATGCTCTTTTTTCTGTATTTGCTGGCTACACTGCAGCATCCTTCCATGGCCAGTATGCTGAGAATGGATGGGAAAGGACGGTTGGTCTTGCAGGGGTCCTTTACACTGGACCAGTGTTTGTTGCAGCCTCTATCCTCAACATAGTTGCAATCTCTTACAGGGCTACAGTTGGACTCCCATTTGGCTCCATTATTGTTATTATTGTTTTATTAACATTTCTCGCCGTCCCATTGCTTGCATTTGGTGGAGTGATCGGATACCGATTTAGATCTAAATTTCAAAGCACCTCTGCTGCAAAGAGACACCCAAAAGACATTCAACAGCTTGCTTGGTACAGGAGAACACCATTTCTAATGTTTATCGGGGGTCTTGTGCCTTTTAGTGCAATTGTTCTGCAATTACACCAAGTGTATGCTAGTATGTGGGGCTACAAAATATACACTCTTCCTAGCATTTTGTTTGTCACCTTCATTCCTGTCATTGTGATCATTGCACTTGTCAGTATTGGCTTGACATACATTCAACTATCTGTGGAAGACCATGAATGGTGGTGGAGGTCAGTGCTGTGTGGTGGCTCAACAGCCATTTTCATGTTTGGGTATTCTATCTACTTCTATGTGAGATCAAATATGAGTGGATTCTTGCAGCTATCATTCTTTGTTGGCTATAATGCATGCCTATGCTATGCTTTCTTCCTAATATTTGGTGCAATCAGTTTCAGAGTTTCATTTCTCTTTGTTCGCTTTATATACCACAATGTTAAAAGAGAGTAA 1761 0.4157 MAEKHHLILLLLCATLQFSSSSPSDHFYNVGELVPFFINKVGPFNNPSETYEYYDLPFCAPVPIVKKRESLGEVLNGDRLSNALYEFKFREDKIDETLCPKKLTVDEIGFFKRAIDREFYFQFYLDDLPFWGFIGKLEEDRWTPGGGGQNYYLFTHVQFDVLYHENQVIQVNAFGDPNRAVDITKDVGVDVKFTYSVTWNATKIRFENRMDRYSRASLMSVHQQVHWFSFINSIVIILLLTGLLALLYMRHLRNDLKKYSDANEEDREVGWKCLHGDVFRPPANSSLLFAVVGTGTQLLILTCVLLFLALIGTLYPYNRGGLLNWLVLLYALFSVFAGYTAASFHGQYAENGWERTVGLAGVLYTGPVFVAASILNIVAISYRATVGLPFGSIIVIIVLLTFLAVPLLAFGGVIGYRFRSKFQSTSAAKRHPKDIQQLAWYRRTPFLMFIGGLVPFSAIVLQLHQVYASMWGYKIYTLPSILFVTFIPVIVIIALVSIGLTYIQLSVEDHEWWWRSVLCGGSTAIFMFGYSIYFYVRSNMSGFLQLSFFVGYNACLCYAFFLIFGAISFRVSFLFVRFIYHNVKRE* 587
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra2g0852 586 Coils Coil 249 269 - -
Vra2g0852 586 PANTHER TRANSMEMBRANE 9 SUPERFAMILY PROTEIN 8 585 IPR004240 GO:0016021
Vra2g0852 586 Pfam Endomembrane protein 70 50 543 IPR004240 GO:0016021
Vra2g0852 586 PANTHER TRANSMEMBRANE 9 SUPERFAMILY MEMBER 5 8 585 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra2g0852 Vra-Chr2 7990923 7994538 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vra2g0852 9 586 Miscellaneous Gene Families AT2G01970 49.063 0.0 601
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra2g0852 K17085 - gmx:100818419 1056.2
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vra2g0852 2 7990923 7994538 Vra2g0852 2 7990923 7994538 ECH