Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra2g0846 ATGCATAATGACACAGAAGAAAAAGATGGATCTGAAACCGAAACCCTCAAACAAATCTTCGATCCGTTTTCTTCTTTTCCACGTATAGCAACTGTGAAACCTAATTTCTCCACTCTTCCGATGAAACGCACGGTTCGGCCTCTCTTCGCGCTCCTCCTCCTCCTAGTCTTCGCCGCCACGCTCACTTCACGCGTGGTCCTCCGCCGCGGCATTCTCTCCATCGAGCTCGAGTACCGCGTCCGGATCGGCAACCCTCCGCCGCCGCAGCTCAACGACACGCTCCTACACCACGCCGCGGTGGAAATCGGCGAGGAGAAGTTCAAACAGGAGATCCAGAACCTCCTCGACGGAAACTTCGGCAGCCATGCGCGGCACCGTACATTCGTCTCCTGGCGTAGATTTATTCACCACGACCGCGGCGGAACCTCCGCCAACATCCCGGCGACGCTCCGGTCGCCCCTTTTCTACCGGTACTGGCTCGACTTCCGGAAGGTTCTGCATGATTGGTTCAGGAAGCGACGATTCCAACCCGGTATTATGTCCGAGTTGACTCGGTCACTCAAGCTTCCTATTGATTCACACAACAAAGTAGTAACCGATGGCAAAAATAGATATTCTTCTTGTGCTGTTGTTGGGAACAGTGGGATTTTGCTGAATAGGGATTATGGAAGTGAAATTGATGCACATGAGGTTGTGATAAGGTTGAACAATGCTAGGGTTGATCACTTTGAAACCAAGGTTGGGAAGAAAACTAGCATTTCATTTATGAATAGTAACATTCTACATTTGTGTGCTAGAAGAGCTGGGTGTTTTTGTCATCCTTATGGTGACCACGTTCCGATTGTCATGTATATTTGCCAGGCCGTGCATTTCTTGGATTACACTGCGTGTAATGCTTCTCACAAGGCTCCTTTATTGGTCACTGATCCTAGGTTTGATGTGTTGTGTGCGAGGATTGTGAAGTATTATTCCTTGAAGAGGTTCGTGGAAGAGAGTGGGAAGGGCTTGGAGAAGTGGGGTGAGGATCACGATGGGGCTCTTTTTCATTACTCTTCTGGGATGCAAGCTGTGATGCTGGCTTTGGGTATTTGTGATAGGGTTAGCATTTTTGGGTTTGGAAAATCGGCTTCTGCCAAGCATCATTACCACACTAACCAGAAGGCTGAGCTTCATTTGCATGATTATGAGGCTGAGTATGCGTTTTACAGGGACCTTGTTGATGGACACAGGCCAATTCCCTTCCTTGAGGACAGGTTTAAGGTTCCTCCTGTTGTTATGTATCATTGA 1287 0.4872 MHNDTEEKDGSETETLKQIFDPFSSFPRIATVKPNFSTLPMKRTVRPLFALLLLLVFAATLTSRVVLRRGILSIELEYRVRIGNPPPPQLNDTLLHHAAVEIGEEKFKQEIQNLLDGNFGSHARHRTFVSWRRFIHHDRGGTSANIPATLRSPLFYRYWLDFRKVLHDWFRKRRFQPGIMSELTRSLKLPIDSHNKVVTDGKNRYSSCAVVGNSGILLNRDYGSEIDAHEVVIRLNNARVDHFETKVGKKTSISFMNSNILHLCARRAGCFCHPYGDHVPIVMYICQAVHFLDYTACNASHKAPLLVTDPRFDVLCARIVKYYSLKRFVEESGKGLEKWGEDHDGALFHYSSGMQAVMLALGICDRVSIFGFGKSASAKHHYHTNQKAELHLHDYEAEYAFYRDLVDGHRPIPFLEDRFKVPPVVMYH* 429
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra2g0846 428 PANTHER BETA-1,6-GALACTOSYLTRANSFERASE GALT29A 40 428 - -
Vra2g0846 428 PANTHER BETA-1,6-GALACTOSYLTRANSFERASE GALT29A 40 428 - -
Vra2g0846 428 Pfam Glycosyltransferase family 29 (sialyltransferase) 188 407 IPR001675 GO:0006486|GO:0008373
Vra2g0846 428 PIRSF Sialyl_trans 41 288 IPR012163 GO:0006486|GO:0008373
Vra2g0846 428 PIRSF Sialyl_trans 317 410 IPR012163 GO:0006486|GO:0008373
Vra2g0846 428 Gene3D Glycosyl transferase family 29 92 410 IPR038578 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vra2g0846 173 257 Glycosyltransferase AT3G48820 31.461 3.41e-08 53.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra2g0846 K00786 - gmx:100816284 756.518
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vra2g0846 2 7888925 7890248 Vra2g0846 2 7888925 7890248 ECH