Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra2g0819 ATGTTTTTGGTGGTAAGACCATGTGGTTCTTCTTCTGCGGGTATTCATCGTCTTCAACCCACTCCCACATCGCACCGTAGTAGAAACGTCGTCATTAGATGCTCGCTCACCAGCGTGCAGGAGAAGAAGGAGAAAGCTCAGTTGGATTCGGAGCTGCAGCCTTCCCTGGCATTTCCGCCGATCAGGGCGGCGAAGAGGGTGGTTCTGGTGAGGCACGGGCAAAGCACGTGGAACGCGGAGGGGAGAATCCAAGGAAGCTCTAATTTCTCTGTTCTGACGAAGAAGGGGGAGTCTCAGGCTGAGACCTCACGCCAAATGCTCATCGACGACCACTTCGATGCCTGCTTTGCCAGTCCTTTGGCTCGATCCAAGAAAACCGCTGAAATCATTTGGGGATCTCGCCAGGACCCCATCATTACCGACTTTGATTTGAGGGAAATCGATTTGTACTCCTTTCAAGGTCTGCTGAAGCATGAGGGGAAAGCAAAATTTGGTTCTGCTTATCGTCAATGGCAGGTGGATGCTGAGAATTTCATCATTGATGGTCATTATCCAGTTAGAGAATTGTGGGAACGTGCTAGAAGCTGCTGGACTAAAATCTTAGCTCATGATAGCAGGTCTGTTCTTGTGGTTGCTCACAATGCTGTTAATCAGGCTCTTGTTGCCACAGCAATTGGTCTGGGGTCCGAGTATTTCAGAACATTACTTCAGAGCAATTGTGGTGTTAGTGTGCTGGACTTCATCCCAAGATCTGAGGATGGATCTCCGCATATTTGCCTTAACCGCTTAAATCAGACCCCTGGTTCACCTATTGCTGGTGGGAAATCTGGAGGTCGAGAGACAAGTAAGAGGATCATACTTGTTTGTAATGGATCAACACAAGGAAATACAGAGGATGGTTTTCCTTTGGGTGGTGATCAACCATTGAACATGCTTGGTGTCATACAGTCCCAGAAATCTGCAGAGCTACTACTTGATTTGAGAGTGAGTTCCATAATTAGCAGTCCTAATAAAGCCTGTGTTGGGACAGCCTCGGTAATCTCCCAGGTACAAGAAGCTGCAGACTGCTTGGGAGCTGACTGTGTGCCTCGATATGTTGAGATGAAGCAGATGGGGGACCTTGATGTTGAAGCTATCTTCAAACAATCTGAAACGGATATATCCAATTTTCCGCCATTTCAACCTGGTTGGTTAAATAGAGTTGATGATGGACTGAGAACAACATTATGGAATCAATCTGGAAAAGCCTGGCTATCTTTGTTGGATGAAATATCTGATGAATCTAAGCAAGGAGAAGTTATAGTGGCAGTTGGTCATCCTGCAATAAACATAGCACTAATGGGGCACTGCCTTAATTTGAGCAAAGAATGGTTGGGATCATTTCATCTTGATGCAGGAAGCGTTAGTGTTCTTGATTTCCCTGATGGAGCTAAGGGAAAAGGTGTCATCAGATGCATAAATTATACTGCACATTTGGGGAGGTGGTCCATACCTATCACAAGATCAACAGAAGATGGTGAAGAGTTTTAA 1530 0.4601 MFLVVRPCGSSSAGIHRLQPTPTSHRSRNVVIRCSLTSVQEKKEKAQLDSELQPSLAFPPIRAAKRVVLVRHGQSTWNAEGRIQGSSNFSVLTKKGESQAETSRQMLIDDHFDACFASPLARSKKTAEIIWGSRQDPIITDFDLREIDLYSFQGLLKHEGKAKFGSAYRQWQVDAENFIIDGHYPVRELWERARSCWTKILAHDSRSVLVVAHNAVNQALVATAIGLGSEYFRTLLQSNCGVSVLDFIPRSEDGSPHICLNRLNQTPGSPIAGGKSGGRETSKRIILVCNGSTQGNTEDGFPLGGDQPLNMLGVIQSQKSAELLLDLRVSSIISSPNKACVGTASVISQVQEAADCLGADCVPRYVEMKQMGDLDVEAIFKQSETDISNFPPFQPGWLNRVDDGLRTTLWNQSGKAWLSLLDEISDESKQGEVIVAVGHPAINIALMGHCLNLSKEWLGSFHLDAGSVSVLDFPDGAKGKGVIRCINYTAHLGRWSIPITRSTEDGEEF* 510
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra2g0819 509 PANTHER BROAD-SPECIFICITY PHOSPHATASE YOR283W-RELATED 29 250 - -
Vra2g0819 509 PANTHER BROAD-SPECIFICITY PHOSPHATASE YOR283W-RELATED 428 509 - -
Vra2g0819 509 CDD HP_PGM_like 66 247 IPR013078 -
Vra2g0819 509 CDD HP_PGM_like 284 484 IPR013078 -
Vra2g0819 509 PANTHER 2-CARBOXY-D-ARABINITOL-1-PHOSPHATASE-RELATED 29 250 - -
Vra2g0819 509 PANTHER 2-CARBOXY-D-ARABINITOL-1-PHOSPHATASE-RELATED 428 509 - -
Vra2g0819 509 SUPERFAMILY Phosphoglycerate mutase-like 65 260 IPR029033 -
Vra2g0819 509 SMART PGAM_5 284 446 IPR013078 -
Vra2g0819 509 SMART PGAM_5 66 220 IPR013078 -
Vra2g0819 509 Gene3D - 277 496 IPR029033 -
Vra2g0819 509 Pfam Histidine phosphatase superfamily (branch 1) 285 477 IPR013078 -
Vra2g0819 509 Pfam Histidine phosphatase superfamily (branch 1) 67 249 IPR013078 -
Vra2g0819 509 ProSitePatterns Phosphoglycerate mutase family phosphohistidine signature. 69 78 IPR001345 GO:0003824
Vra2g0819 509 SUPERFAMILY Phosphoglycerate mutase-like 282 497 IPR029033 -
Vra2g0819 509 Gene3D - 65 253 IPR029033 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra2g0819 Vra-Chr2 7476109 7480347 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra2g0819 K22200 - gmx:100794084 889.026
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vra2g0819 2 7476109 7480347 Vra2g0819 2 7476109 7480347 ECH