Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra2g0796 ATGCAGCCGAATTTGTTTCCCTTTGGAAGTGTGCTGGGGAATCCGTTTATTTTCAATGGTGATTTGAGCGAGGGAGGGATCGAGAGCTCTAGGGTTTTCTTCTTGCTCCCGTTCTTCTTGCTCTCCCAGGGAGGAGCAATGGATTTGTCCAAGGTTGGGGAAAAATTCTTGAGCTCCGTTAGGTCCGCGAGATCTATCGGATTGCTCCCTCCCGTTCCTGATCGTCCCGAGGTTCCAGCTCGAGCTTCAGCAGCTGCTGCTGTAGCTCGTGCTCTTGCAGGGTTACCTCCTCATCAGAGATATAGTTTTTCTTCAAGTTCAGAAGAATTGAGTTCAATATATGGAAGCAGACCTCAAGGCCAAGTAGTCGAGGAGCTGGAGGATGAATTCTATGAAGAGGACTTTGATCCAATTAAGCATATTTTAGAGCATGTTCCAGCTGATGAGAATGAGCTAACGTATTTTGAAAAACAGGCTGCCCTTAGATTGGTACAACTGGATAAAGTGGCTGAACATTTATCTCGCCATGTTATGGAGCATCATGAAGTAATGGTGAAGGGGATGAATTTGGTCAGAGAATTGGAAAAAGACTTAAGGATTGCAAATGTCATCTGTATGAATGGAAGGAGACATTTGACCTCGTCTATGAATGAGGTTTCAAGGGATCTGATTGTGAATTCTTATTCCAAAAAGAAACAAGCTCTTCTGGACATGCTTCCAACCTTGATTGAACTTCAACGGGCTCTGAACATGCAATCAACACTTGAATCCCTTGTAGAGGAAGGGAATTACTGGAAGGCCTTTCAAGTTCTATCTGAGTATTTGCAACTCTTAGATAGTTTGTCAGAGCTTTCAGCAATACAAGAAATGAGCCGTGGTGTGGAGGTTTGGCTGGGAAGAACGTTGCAGAAGCTGGATGCTCTTTTATTGGGAGTATGTCAAGAATTCAAGGAAGATGGCTATATAACAGTAATTGATGCATATGCATTAATAGGGGATACTGCTGGTCTTGCTGAAAAGATACAGAGTTTCTTCATGCAAGAAGTTATATCAGAAACACACTCTGTATTAAAGGGTGTCATGCATGAGGACGAGGAGGAAATTTTGCAAAATAGTAGGCTCACTTACAGCGATCTATGCCTCAGAATACCTGATTCAAAGTTCAGGCAATGCTTATTAAGAACGCTGGCTGTTCTATTTGACCTTATGTGTTCATACCATGAAATTATGGATTTCGAGCTGGAAAGAAAGGACACAGTACAAAATTCAAATAAGTGCAATGAAGAGATTTCCTGTAGTCCAGGCGCTCAGGAAGTTGATTCAGATGTAAGAGTCTCCAACAATTCTTTGTCCAGTTCAGGAGATATATTACATGGTTCATCTTCTAGGGAGGAATCTGCAACAATGAGCTCTCTGACTGAAACTAGTGGTTCACCATACAGTGATTATCATGATCCAATTAAGGAGACTGGGAAGGAGGACAGTGCAACGTTAAACATTGAATCCCCTTGGTACCATCTTCGTAAAGAAGCTATAACCTTTGTGTCACAGACCCTTCAAAGAGGGCGAAGGAATTTGTGGCATCTCACTGCAAGTCGAGTGTCTGTTTTGCTTTCTTCTGCTGCAGTTTGTACCGCCAGTATTCATCAATTCTTGAAAAATTATGAAGAACTCAGTGTGTTTATTTTGACTGGGGAAGCCTTTTGTGGAATCGAAGCAGTTGAATTTAGGCAGAAGCTAAAGGCTGTGTGTGAAAACTATTTCACAGCTTTTCATCGACAAAATGTGCATGCACTAAAAATGGTTATGGAGAAAGAGACTTGGCTAAAATTACCTCTAGAAACAGTACAAATGATCAGTTTTGCAGGACTTATTGGTGATGGTGCACCCTTGATTTCTTTATCCAGTGGCAAATCAATTAATGCCGGTGCATTCCATTCCCATAAATCAGTGAATATGGTTCATACTGGTGCAAGGAAAAATGGGTTTTCCCACTGGATCAAAACTGGAAACCCTTTCTTGCAAAAATTACCTAACTCCAACGAAGGTCATGGTTACTCCCAACCTAATGGATTAGTTCATGGTGAATCTGATGGAAGTTCAACCAAATACTTTTATGATGATAGAACACCCAGAAACAACGATTCCAATCACATAAATGGTGCCAATTCTGTTTCAGAAGATGAAGATGAGGATCTTCTTGCTGACTTTATTGATGAAGACAGCCAACTACCAAGTCGAAGTTCTAAACCCTTTCATTCAAGAACCCTTTCTTCACATGGTAATGATGACGAGAATACAACACAAACTGGATCTTCTCTCTGTCTTTTAAAGTCTATGGATAAATATGCAAGGCTTATGCAGAAATTGGAAGTGGTAAATGTTGAGTTCTTTAAGGGAATATGCCAATTGTTTGAAATATTTTTCTATAATATATATGAAACATTTGGTCAGCAAAACACGAGCTCAAGTGGAAAAAGCTCAACTAACTCTCTTAATTATCGCTTGACAACAGCTTTGTCTAGAATAAACCAAGATTGTGAAGAGTGGATTAAGCCCCAATCGTCTTCACCAACATCTTTGACCTCTTCATTTGCACATGCAGAATTGACACCTACAAACCCGCCCAATGCAAATCTTGGTCTTTCCTCAGGCACCTCGTTTGGTCTCACGGAAAGATGTGTGGCTGTTGACACTATATCACTTGTTGCTCGAATACTGAATAGATCTAAAGCTCATCTCCAATCAATGCTCTTGCAAAGTAATTCAACTATACTTGAGGATTTCTACGTTCATCTGGTGGATGCTGTACCAGATCTTACAGAACATATTCATCGGACTACAGTGAGACTATTGTTGCACATTAATGGATATGTTGATCGTGTTGCCAATTGTAAATGGGAATTAAAAGAGCTTGGCATGGAGCATAATGGATATGTTGATTTGTTGCTGGGGGAGTTTAAGCACTATAAAACAAGACTTGCTCATGGAGGAATTCGTATAGAGATTCAAGGCCTATTATTGGATTATGGGCTTGAAATTGTGGCAGAAACTCTTGTTGAAGGACTTTCAAGGGTGAAGAGATGCAGTGATGAAGGACGAGCTCTTATGTCATTAGATCTACAGGTTTTGATTAATGGATTACAGCATTTTGTGTCAGTGAATGTGAAGCCCAAGCTTCAAATGGTTGAAACTTTCATCAAGGCTTACTACCTTCCCGAGACAGAATATGTGCACTGGGCTCGAGCACACCCAGAATACACTAAAAGCCAGATTATTGGACTGATCAACCTTGTTGCCACTATGAAAGGTTGGAAGAGGAAAACCAGGTTGGATATACTGGAAAAGATTGAATGA 3357 0.4069 MQPNLFPFGSVLGNPFIFNGDLSEGGIESSRVFFLLPFFLLSQGGAMDLSKVGEKFLSSVRSARSIGLLPPVPDRPEVPARASAAAAVARALAGLPPHQRYSFSSSSEELSSIYGSRPQGQVVEELEDEFYEEDFDPIKHILEHVPADENELTYFEKQAALRLVQLDKVAEHLSRHVMEHHEVMVKGMNLVRELEKDLRIANVICMNGRRHLTSSMNEVSRDLIVNSYSKKKQALLDMLPTLIELQRALNMQSTLESLVEEGNYWKAFQVLSEYLQLLDSLSELSAIQEMSRGVEVWLGRTLQKLDALLLGVCQEFKEDGYITVIDAYALIGDTAGLAEKIQSFFMQEVISETHSVLKGVMHEDEEEILQNSRLTYSDLCLRIPDSKFRQCLLRTLAVLFDLMCSYHEIMDFELERKDTVQNSNKCNEEISCSPGAQEVDSDVRVSNNSLSSSGDILHGSSSREESATMSSLTETSGSPYSDYHDPIKETGKEDSATLNIESPWYHLRKEAITFVSQTLQRGRRNLWHLTASRVSVLLSSAAVCTASIHQFLKNYEELSVFILTGEAFCGIEAVEFRQKLKAVCENYFTAFHRQNVHALKMVMEKETWLKLPLETVQMISFAGLIGDGAPLISLSSGKSINAGAFHSHKSVNMVHTGARKNGFSHWIKTGNPFLQKLPNSNEGHGYSQPNGLVHGESDGSSTKYFYDDRTPRNNDSNHINGANSVSEDEDEDLLADFIDEDSQLPSRSSKPFHSRTLSSHGNDDENTTQTGSSLCLLKSMDKYARLMQKLEVVNVEFFKGICQLFEIFFYNIYETFGQQNTSSSGKSSTNSLNYRLTTALSRINQDCEEWIKPQSSSPTSLTSSFAHAELTPTNPPNANLGLSSGTSFGLTERCVAVDTISLVARILNRSKAHLQSMLLQSNSTILEDFYVHLVDAVPDLTEHIHRTTVRLLLHINGYVDRVANCKWELKELGMEHNGYVDLLLGEFKHYKTRLAHGGIRIEIQGLLLDYGLEIVAETLVEGLSRVKRCSDEGRALMSLDLQVLINGLQHFVSVNVKPKLQMVETFIKAYYLPETEYVHWARAHPEYTKSQIIGLINLVATMKGWKRKTRLDILEKIE* 1119
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra2g0796 1118 Pfam Protein of unknown function C-terminus (DUF2451) 888 1118 IPR019514 -
Vra2g0796 1118 Pfam Vacuolar-sorting protein 54, of GARP complex 123 412 IPR019515 -
Vra2g0796 1118 MobiDBLite consensus disorder prediction 450 488 - -
Vra2g0796 1118 PANTHER UNCHARACTERIZED 3 1118 IPR040047 GO:0032456|GO:0042147|GO:1990745
Vra2g0796 1118 MobiDBLite consensus disorder prediction 677 728 - -
Vra2g0796 1118 MobiDBLite consensus disorder prediction 677 697 - -
Vra2g0796 1118 MobiDBLite consensus disorder prediction 743 770 - -
Vra2g0796 1118 PANTHER VACUOLAR PROTEIN SORTING-ASSOCIATED PROTEIN-RELATED 3 1118 - -
Vra2g0796 1118 MobiDBLite consensus disorder prediction 450 480 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra2g0796 K23288 - gmx:100803274 1939.85
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vra2g0796 2 7111518 7139571 Vra2g0796 2 7111518 7139571 ECH