Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra2g0795 ATGGAAAAGCTCCCTCATTTACTATCCATTTTCCTGTTCATTGCTTTGCACTTTCATGGAGGAAAGGTTGTAGCTTTCAAAACCCAAGACGGATCAGAGGAATGGGGATACGTTCAAGTCAGACCCAAAGCACACATGTTTTGGTGGCTTTACAGAAGTCCCTATAGAGTGGAAGATCCCTCTAAGCCATGGCCAATTGTTCTCTGGTTGCAAGGAGGACCTGGTGCTTCAGGGGTTGGAATTGGAAATTTTGAGGAGGTTGGGCCTTTGAACACATACTTGAAGCCACGGAATTCCACATGGTTGAAAAAAGCAGATCTACTGTTTGTGGACAATCCAGTTGGAACCGGGTACAGTTTTGTGGAGGACAAAAAACTGTTTGTGAAAACAGATGTTGAAGCAGCCACCGACTTGACTACATTGTTGATTGAATTGTTCAACAGGGATGAGAAACTGCAAAAGAGCCCTCTGTTCATCGTGGCAGAGTCATATGGTGGCAAATTTGCTGTCACTCTTGGTTTATCTGCTCTGGAAGCTATAGAAGCTGGGAAATTGAAGCTTAGACTTGGAGGTGTGGCATTAGGAGACAGTTGGATCTCCCCTGAAGATTTTGTGTTCTCATGGGGTCCTCTCCTTAAAGACCTCTCACGACTCGACGATAGTGGCCTGCAACAATCAAACAGTATTGCTGAGAGGATCAAGCAGCAACTTGAGGATGGTAAATTTGTTGAAGCCACCGACTCGTGGACTGAACTTGAGTCTGTGATTTCCATCAAAAGCAACCATGTGGACTTCTACAATTTTTTGGAGGATGAAGGAAGTGATGATGTTGCAACATTGGAGTTAGCCTTAAATAAAAAAATATCAATGAAGAGGTACTCCAGGTATCTCACTTCCTTGAGGTCAAGGTCAAGAACTCCTGGTGGAGATGGTGATCTTGATACATTACTAAACGGTGTCATAAAGAAAAAGTTAAAGATCATCCCAGAGAATGTCACATGGGGAGGGCAATCCGGTCATGTTTTCGATTACCTTGCAGGTGATTTTATGAAACCAAGAATCAATGAGGTTGACGAACTGCTGGCAAAAGGGGTCAACGTCACAGTGTACAATGGGCAAATTGATCTGATTTGTTCAACCAAAGGGACTGATGCTTGGGTTCATAAACTGAAGTGGGAAGGGCTTAAAAATTTCTTGGCAAAAGATAGAACACCCCTCTACTGTGGAAGTGACAAATCAACAACCAAAGGCTTTCTTCAATCATATAAAAATCTATTCTTCTATTGGATCCTCAAAGCTGGCCATTTTGTACCTACTGATCAACCTTGTGTGGCACTAGAAATGGTGGGTGCAATTACACAGTCACCAGCTACTTGA 1377 0.4306 MEKLPHLLSIFLFIALHFHGGKVVAFKTQDGSEEWGYVQVRPKAHMFWWLYRSPYRVEDPSKPWPIVLWLQGGPGASGVGIGNFEEVGPLNTYLKPRNSTWLKKADLLFVDNPVGTGYSFVEDKKLFVKTDVEAATDLTTLLIELFNRDEKLQKSPLFIVAESYGGKFAVTLGLSALEAIEAGKLKLRLGGVALGDSWISPEDFVFSWGPLLKDLSRLDDSGLQQSNSIAERIKQQLEDGKFVEATDSWTELESVISIKSNHVDFYNFLEDEGSDDVATLELALNKKISMKRYSRYLTSLRSRSRTPGGDGDLDTLLNGVIKKKLKIIPENVTWGGQSGHVFDYLAGDFMKPRINEVDELLAKGVNVTVYNGQIDLICSTKGTDAWVHKLKWEGLKNFLAKDRTPLYCGSDKSTTKGFLQSYKNLFFYWILKAGHFVPTDQPCVALEMVGAITQSPAT* 459
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra2g0795 458 PANTHER SERINE PROTEASE FAMILY S10 SERINE CARBOXYPEPTIDASE 8 456 IPR001563 GO:0004185|GO:0006508
Vra2g0795 458 PRINTS Carboxypeptidase C serine protease (S10) family signature 97 109 IPR001563 GO:0004185|GO:0006508
Vra2g0795 458 PRINTS Carboxypeptidase C serine protease (S10) family signature 110 120 IPR001563 GO:0004185|GO:0006508
Vra2g0795 458 PRINTS Carboxypeptidase C serine protease (S10) family signature 145 170 IPR001563 GO:0004185|GO:0006508
Vra2g0795 458 PRINTS Carboxypeptidase C serine protease (S10) family signature 425 438 IPR001563 GO:0004185|GO:0006508
Vra2g0795 458 ProSitePatterns Serine carboxypeptidases, serine active site. 159 166 IPR018202 GO:0004185
Vra2g0795 458 Gene3D alpha/beta hydrolase 17 457 IPR029058 -
Vra2g0795 458 Pfam Serine carboxypeptidase 30 451 IPR001563 GO:0004185|GO:0006508
Vra2g0795 458 SUPERFAMILY alpha/beta-Hydrolases 29 455 IPR029058 -
Vra2g0795 458 PANTHER CARBOXYPEPTIDASE 8 456 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra2g0795 Vra-Chr2 7102946 7108811 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra2g0795 K09646 - gmx:100808412 806.594
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vra2g0795 2 7102946 7108811 Vra2g0795 2 7102946 7108811 ECH